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(-) Description

Title :  STRUCTURE OF THE CONSERVED HYPOTHETICAL PROTEIN VC1805 FROM PATHOGENICITY ISLAND VPI-2 OF VIBRIO CHOLERAE O1 BIOVAR ELTOR STR. N16961 SHARES STRUCTURAL HOMOLOGY WITH THE HUMAN P32 PROTEIN
 
Authors :  M. A. Sheikh, J. A. Potter, K. A. Johnson, E. F. Boyd, G. L. Taylor
Date :  25 May 07  (Deposition) - 24 Jul 07  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.13
Chains :  Asym./Biol. Unit :  A
Keywords :  Pathogenicity Island, Hypothetical Protein, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. A. Sheikh, J. A. Potter, K. A. Johnson, R. B. Sim, E. F. Boyd, G. L. Taylor
Crystal Structure Of Vc1805, A Conserved Hypothetical Protein From A Vibrio Cholerae Pathogenicity Island, Reveals Homology To Human P32.
Proteins V. 71 1563 2008
PubMed-ID: 18300248  |  Reference-DOI: 10.1002/PROT.21993

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Organism Scientific: VIBRIO CHOLERAE
    Organism Taxid: 127906
    Strain: O1
    Synonym: HYPOTHETICAL PROTEIN VC1805
    Variant: BIOVAR ELTOR STR. N16961

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
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Chain A from PDB  Type:PROTEIN  Length:129
 aligned with Q9KR41_VIBCH | Q9KR41 from UniProtKB/TrEMBL  Length:148

    Alignment length:141
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144 
         Q9KR41_VIBCH     5 LFKPTHLPISKPFHALLANILSEHQAKSEVQATSKEVVMNFRDSSYSAEDGGFHPVEIALSQSSDGQWCIEYITDFAYVGNHFPELERCLDFDFQRGDFFTAYHGWNPIVGNRDARELYQLWESNFLAYVATEAFDDISLT 145
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------DUF2787-2v1lA01 A         :14-145                                                                                                    Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhh---------.eeeeee.............eeeeeee.....eeeeeeeeeeee---..eeeeeeeee....eeee...eeee...hhhhhhhhhhhhhhhhhhhhh....eeeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2v1l A   5 LFKPTHLPISKPFHALLANILSEHQA---------EVVMNFRDSSYSAEDGGFHPVEIALSQSSDGQWCIEYITDFAYV---FPELERCLDFDFQRGDFFTAYHGWNPIVGNRDARELYQLWESNFLAYVATEAFDDISLT 145
                                    14        24     |   -     |  44        54        64        74        |-  |     94       104       114       124       134       144 
                                                    30        40                                         83  87
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: DUF2787] (1)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q9KR41_VIBCH | Q9KR41)
molecular function
    GO:0003674    molecular_function    Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
biological process
    GO:0008150    biological_process    Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
cellular component
    GO:0005575    cellular_component    The part of a cell, extracellular environment or virus in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

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