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(-) Description

Title :  SOLUTION STRUCTURE OF THE BACILLUS ANTHRACIS SORTASE A-SUBSTRATE COMPLEX
 
Authors :  A. H. Chan, S. Yi, M. E. Jung, R. T. Clubb
Date :  22 Jun 14  (Deposition) - 09 Sep 15  (Release) - 09 Sep 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (20x)
NMR Structure *:  A,B  (1x)
Keywords :  Sortase, Srta, Transpeptidase, Hydrolase-Hydrolase Substrate Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. H. Chan, S. W. Yi, A. L. Terwilliger, A. W. Maresso, M. E. Jung, R. T. Clubb
Structure Of The Bacillus Anthracis Sortase A Enzyme Bound To Its Sorting Signal: A Flexible Amino-Terminal Appendage Modulates Substrate Access
J. Biol. Chem. 2015
PubMed: search  |  Reference-DOI: 10.1074/JBC.M115.670984

(-) Compounds

Molecule 1 - LPXTG-SITE TRANSPEPTIDASE FAMILY PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET15B
    Expression System Vector Type: VECTOR
    Fragment: UNP RESIDUES 57-210
    Gene: BAS0654, SRTA
    Organism Common: ANTHRAX, ANTHRAX BACTERIUM
    Organism Scientific: BACILLUS ANTHRACIS STR. STERNE
    Organism Taxid: 260799
 
Molecule 2 - BOC-LPAT*
    Chains: B
    Engineered: YES
    Organism Scientific: SYNTHETIC
    Organism Taxid: 32630
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
NMR Structure (20x): AB
NMR Structure * (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

NMR Structure (2, 2)
No.NameCountTypeFull Name
1B271Mod. Amino Acid(2R,3S) 3-AMINO-4-MERCAPTO-2-BUTANOL
2BOC1Mod. Amino AcidTERT-BUTYL HYDROGEN CARBONATE
NMR Structure * (2, 2)
No.NameCountTypeFull Name
1B271Mod. Amino Acid(2R,3S) 3-AMINO-4-MERCAPTO-2-BUTANOL
2BOC1Mod. Amino AcidTERT-BUTYL HYDROGEN CARBONATE

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:59 , LEU A:103 , VAL A:110 , ALA A:124 , GLY A:125 , HIS A:126 , PRO A:168 , LYS A:170 , TRP A:171 , ILE A:185 , THR A:186 , CYS A:187 , ARG A:196BINDING SITE FOR CHAIN B OF BOC-LPAT*

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2RUI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2RUI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2RUI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2RUI)

(-) Exons   (0, 0)

(no "Exon" information available for 2RUI)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:158
                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhh..hhh.eeeeeeehhhheeeeee.....hhhhhh.ee..........eeeee............hhhhh....eeeeee..eeeeeeeeeeeee...hhhhhh.....eeeee..........eeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2rui A  53 GSHMDASKIDQPDLAEVANASLDKKQVIGRISIPSVSLELPVLKSSTEKNLLSGAATVKENQVMGKGNYALAGHNMSKKGVLFSDIASLKKGDKIYLYDNENEYEYAVTGVSEVTPDKWEVVEDHGKDEITLITCVSVKDNSKRYVVAGDLVGTKAKK 210
                                    62        72        82        92       102       112       122       132       142       152       162       172       182       192       202        


Chain B from PDB  Type:PROTEIN  Length:5
                                     
               SCOP domains ----- SCOP domains
               CATH domains ----- CATH domains
               Pfam domains ----- Pfam domains
         Sec.struct. author ..... Sec.struct. author
                 SAPs(SNPs) ----- SAPs(SNPs)
                    PROSITE ----- PROSITE
                 Transcript ----- Transcript
                 2rui B 701 xLPAt 705
                            |   |
                          701-BOC
                              705-B27
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2RUI)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2RUI)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2RUI)

(-) Gene Ontology  (4, 4)

NMR Structure(hide GO term definitions)

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