Chain A from PDB Type:PROTEIN Length:212
aligned with Q963I9_RENRE | Q963I9 from UniProtKB/TrEMBL Length:233
Alignment length:220
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
Q963I9_RENRE 7 GLKEVMPTKINLEGLVGDHAFSMEGVGEGNILEGTQEVKISVTKGAPLPFAFDIVSVAFSYGNRAYTGYPEEISDYFLQSFPEGFTYERNIRYQDGGTAIVKSDISLEDGKFIVNVDFKAKDLRRMGPVMQQDIVGMQPSYESMYTNVTSVIGECIIAFKLQTGKHFTYHMRTVYKSKKPVETMPLYHFIQHRLVKTNVDTASGYVVQHETAIAAHSTIK 226
SCOP domains d2rh7a1 A:7-226 Green fluorescent protein, GFP SCOP domains
CATH domains 2rh7A00 A:7-226 Green Fluorescent Protein CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhh....--..............hhhhh...eeeeeeeee....eeeeeeeeee.-..eeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeee.-----..eeeeeeeee..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2rh7 A 7 GLKEVMPTKINLEGLVGDHAFSMEGVGEGNILEGTQEVKISVTKGAPLPFAFDIVSVAFg--NRAYTGYPEEISDYFLQSFPEGFTYERNIRYQDGGTAIVKSDISLE-GKFIVNVDFKAKDLRRMGPVMQQDIVGMQPSYESMYTNVTSVIGECIIAFKLQTGKHFTYHMRTVYKSKKPVETMPLYHFIQHRLVKTNV-----YVVQHETAIAAHSTIK 226
16 26 36 46 56 66 | 76 86 96 106 116 126 136 146 156 166 176 186 196 |- | 216 226
66-CRO 114 | 205 211
116
Chain B from PDB Type:PROTEIN Length:213
aligned with Q963I9_RENRE | Q963I9 from UniProtKB/TrEMBL Length:233
Alignment length:220
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
Q963I9_RENRE 7 GLKEVMPTKINLEGLVGDHAFSMEGVGEGNILEGTQEVKISVTKGAPLPFAFDIVSVAFSYGNRAYTGYPEEISDYFLQSFPEGFTYERNIRYQDGGTAIVKSDISLEDGKFIVNVDFKAKDLRRMGPVMQQDIVGMQPSYESMYTNVTSVIGECIIAFKLQTGKHFTYHMRTVYKSKKPVETMPLYHFIQHRLVKTNVDTASGYVVQHETAIAAHSTIK 226
SCOP domains d2rh7b_ B: Green fluorescent protein, GFP SCOP domains
CATH domains 2rh7B00 B:7-226 Green Fluorescent Protein CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhh....--..............hhhhh...eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee.....hhhhhh.eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeee.-----.eeeeeeeeee..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2rh7 B 7 GLKEVMPTKINLEGLVGDHAFSMEGVGEGNILEGTQEVKISVTKGAPLPFAFDIVSVAFg--NRAYTGYPEEISDYFLQSFPEGFTYERNIRYQDGGTAIVKSDISLEDGKFIVNVDFKAKDLRRMGPVMQQDIVGMQPSYESMYTNVTSVIGECIIAFKLQTGKHFTYHMRTVYKSKKPVETMPLYHFIQHRLVKTNV-----YVVQHETAIAAHSTIK 226
16 26 36 46 56 66 | 76 86 96 106 116 126 136 146 156 166 176 186 196 |- | 216 226
66-CRO 205 211
Chain C from PDB Type:PROTEIN Length:212
aligned with Q963I9_RENRE | Q963I9 from UniProtKB/TrEMBL Length:233
Alignment length:220
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
Q963I9_RENRE 7 GLKEVMPTKINLEGLVGDHAFSMEGVGEGNILEGTQEVKISVTKGAPLPFAFDIVSVAFSYGNRAYTGYPEEISDYFLQSFPEGFTYERNIRYQDGGTAIVKSDISLEDGKFIVNVDFKAKDLRRMGPVMQQDIVGMQPSYESMYTNVTSVIGECIIAFKLQTGKHFTYHMRTVYKSKKPVETMPLYHFIQHRLVKTNVDTASGYVVQHETAIAAHSTIK 226
SCOP domains d2rh7c_ C: Green fluorescent protein, GFP SCOP domains
CATH domains 2rh7C00 C:7-226 Green Fluorescent Protein CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....eeeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhh....--..............hhhhh...eeeeeeeee....eeeeeeeeee.-..eeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeee.-----..eeeeeeeee..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2rh7 C 7 GLKEVMPTKINLEGLVGDHAFSMEGVGEGNILEGTQEVKISVTKGAPLPFAFDIVSVAFg--NRAYTGYPEEISDYFLQSFPEGFTYERNIRYQDGGTAIVKSDISLE-GKFIVNVDFKAKDLRRMGPVMQQDIVGMQPSYESMYTNVTSVIGECIIAFKLQTGKHFTYHMRTVYKSKKPVETMPLYHFIQHRLVKTNV-----YVVQHETAIAAHSTIK 226
16 26 36 46 56 66 | 76 86 96 106 116 126 136 146 156 166 176 186 196 |- | 216 226
66-CRO 114 | 205 211
116
Chain D from PDB Type:PROTEIN Length:212
aligned with Q963I9_RENRE | Q963I9 from UniProtKB/TrEMBL Length:233
Alignment length:220
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
Q963I9_RENRE 7 GLKEVMPTKINLEGLVGDHAFSMEGVGEGNILEGTQEVKISVTKGAPLPFAFDIVSVAFSYGNRAYTGYPEEISDYFLQSFPEGFTYERNIRYQDGGTAIVKSDISLEDGKFIVNVDFKAKDLRRMGPVMQQDIVGMQPSYESMYTNVTSVIGECIIAFKLQTGKHFTYHMRTVYKSKKPVETMPLYHFIQHRLVKTNVDTASGYVVQHETAIAAHSTIK 226
SCOP domains d2rh7d_ D: Green fluorescent protein, GFP SCOP domains
CATH domains 2rh7D00 D:7-226 Green Fluorescent Protein CATH domains
Pfam domains (1) GFP-2rh7D01 D:7-223 --- Pfam domains (1)
Pfam domains (2) GFP-2rh7D02 D:7-223 --- Pfam domains (2)
Pfam domains (3) GFP-2rh7D03 D:7-223 --- Pfam domains (3)
Pfam domains (4) GFP-2rh7D04 D:7-223 --- Pfam domains (4)
Sec.struct. author ....eeeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhh....--............hhhhhhh...eeeeeeeee....eeeeeeeee..-..eeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeee.-----..eeeeeeeee..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2rh7 D 7 GLKEVMPTKINLEGLVGDHAFSMEGVGEGNILEGTQEVKISVTKGAPLPFAFDIVSVAFg--NRAYTGYPEEISDYFLQSFPEGFTYERNIRYQDGGTAIVKSDISLE-GKFIVNVDFKAKDLRRMGPVMQQDIVGMQPSYESMYTNVTSVIGECIIAFKLQTGKHFTYHMRTVYKSKKPVETMPLYHFIQHRLVKTNV-----YVVQHETAIAAHSTIK 226
16 26 36 46 56 66 | 76 86 96 106 116 126 136 146 156 166 176 186 196 |- | 216 226
66-CRO 114 | 205 211
116
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |