2RFL - JenaLib

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Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Biological Unit 5 (Jmol Viewer)

Biological Unit 6 (Jmol Viewer)

Biological Unit 7 (Jmol Viewer)

Biological Unit 8 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE PUTATIVE PHOSPHOHISTIDINE PHOSPHATASE SIXA FROM AGROBACTERIUM TUMEFACIENS

Authors :   Y. Kim, T. Binkowski, X. Xu, A. M. Edwards, A. Savchenko, A. Joachimiak, Center For Structural Genomics (Mcsg)

Date :   01 Oct 07 (Deposition) - 23 Oct 07 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.35

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)
Biol. Unit 5: E  (1x)
Biol. Unit 6: F  (1x)
Biol. Unit 7: G  (1x)
Biol. Unit 8: H  (1x)

Keywords :   Alpha-Beta-Alpha Sandwich, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Hydrolase, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Y. Kim, T. Binkowski, X. Xu, J. Gu, Q. Que, A. Savchenko, A. M. Edwards, A. Joachimiak
Crystal Structure Of The Putative Phosphohistidine Phosphatase Sixa From Agrobacterium Tumefaciens.
To Be Published
PubMed: search

Molecule 1 - PUTATIVE PHOSPHOHISTIDINE PHOSPHATASE SIXA
	Atcc	:	33970
	Chains	:	A, B, C, D, E, F, G, H
	EC Number	:	5.4.2.1, 3.1.3.13, 5.4.2.4
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	AGR_C_2511, ATU1358
	Organism Scientific	:	AGROBACTERIUM TUMEFACIENS STR.
	Organism Taxid	:	176299
	Strain	:	C58
	Synonym	:	AGR_C_2511P, UNCHARACTERIZED PROTEIN ATU1358, PHOSPHOGLYCERATE MUTASE

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D
Biological Unit 5 (1x)	:					E
Biological Unit 6 (1x)	:						F
Biological Unit 7 (1x)	:							G
Biological Unit 8 (1x)	:								H

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 36)

No.	Name	Count	Type	Full Name
1	ACY	1	Ligand/Ion	ACETIC ACID
2	GOL	2	Ligand/Ion	GLYCEROL
3	MSE	32	Mod. Amino Acid	SELENOMETHIONINE
4	SCN	1	Ligand/Ion	THIOCYANATE ION

Biological Unit 1 (3, 6)

No.	Name	Count	Type	Full Name
1	ACY	-1	Ligand/Ion	ACETIC ACID
2	GOL	1	Ligand/Ion	GLYCEROL
3	MSE	4	Mod. Amino Acid	SELENOMETHIONINE
4	SCN	1	Ligand/Ion	THIOCYANATE ION

Biological Unit 2 (1, 4)

No.	Name	Count	Type	Full Name
1	ACY	-1	Ligand/Ion	ACETIC ACID
2	GOL	-1	Ligand/Ion	GLYCEROL
3	MSE	4	Mod. Amino Acid	SELENOMETHIONINE
4	SCN	-1	Ligand/Ion	THIOCYANATE ION

Biological Unit 3 (1, 4)

No.	Name	Count	Type	Full Name
1	ACY	-1	Ligand/Ion	ACETIC ACID
2	GOL	-1	Ligand/Ion	GLYCEROL
3	MSE	4	Mod. Amino Acid	SELENOMETHIONINE
4	SCN	-1	Ligand/Ion	THIOCYANATE ION

Biological Unit 4 (2, 5)

No.	Name	Count	Type	Full Name
1	ACY	1	Ligand/Ion	ACETIC ACID
2	GOL	-1	Ligand/Ion	GLYCEROL
3	MSE	4	Mod. Amino Acid	SELENOMETHIONINE
4	SCN	-1	Ligand/Ion	THIOCYANATE ION

Biological Unit 5 (1, 4)

No.	Name	Count	Type	Full Name
1	ACY	-1	Ligand/Ion	ACETIC ACID
2	GOL	-1	Ligand/Ion	GLYCEROL
3	MSE	4	Mod. Amino Acid	SELENOMETHIONINE
4	SCN	-1	Ligand/Ion	THIOCYANATE ION

Biological Unit 6 (1, 4)

No.	Name	Count	Type	Full Name
1	ACY	-1	Ligand/Ion	ACETIC ACID
2	GOL	-1	Ligand/Ion	GLYCEROL
3	MSE	4	Mod. Amino Acid	SELENOMETHIONINE
4	SCN	-1	Ligand/Ion	THIOCYANATE ION

Biological Unit 7 (2, 5)

No.	Name	Count	Type	Full Name
1	ACY	-1	Ligand/Ion	ACETIC ACID
2	GOL	1	Ligand/Ion	GLYCEROL
3	MSE	4	Mod. Amino Acid	SELENOMETHIONINE
4	SCN	-1	Ligand/Ion	THIOCYANATE ION

Biological Unit 8 (1, 4)

No.	Name	Count	Type	Full Name
1	ACY	-1	Ligand/Ion	ACETIC ACID
2	GOL	-1	Ligand/Ion	GLYCEROL
3	MSE	4	Mod. Amino Acid	SELENOMETHIONINE
4	SCN	-1	Ligand/Ion	THIOCYANATE ION

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	HOH A:216	BINDING SITE FOR RESIDUE SCN A 172
2	AC2	SOFTWARE	HOH A:189 , HOH A:230	BINDING SITE FOR RESIDUE GOL A 173
3	AC3	SOFTWARE	ASP G:163 , PHE G:164 , HOH G:200 , HOH G:227	BINDING SITE FOR RESIDUE GOL G 172
4	AC4	SOFTWARE	PHE D:27 , TYR D:88 , HOH D:173	BINDING SITE FOR RESIDUE ACY D 172

(no "SS Bond" information available for 2RFL)

Asymmetric Unit

No.	Residues
1	Phe A:5	-	Pro A:6
2	Asn A:114	-	Pro A:115
3	Phe B:5	-	Pro B:6
4	Asn B:114	-	Pro B:115
5	Phe C:5	-	Pro C:6
6	Asn C:114	-	Pro C:115
7	Phe D:5	-	Pro D:6
8	Asn D:114	-	Pro D:115
9	Phe E:5	-	Pro E:6
10	Asn E:114	-	Pro E:115
11	Phe F:5	-	Pro F:6
12	Asn F:114	-	Pro F:115
13	Phe G:5	-	Pro G:6
14	Asn G:114	-	Pro G:115
15	Phe H:5	-	Pro H:6
16	Asn H:114	-	Pro H:115

(no "SAP(SNP)/Variant" information available for 2RFL)

(no "PROSITE Motif" information available for 2RFL)

(no "Exon" information available for 2RFL)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:149
 aligned with A9CJ67_AGRFC | A9CJ67 from UniProtKB/TrEMBL  Length:169

    Alignment length:164
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163    
         A9CJ67_AGRFC     4 SFPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFNEGIDIVYIDEMYNARSETYLSLIAAQTEVQSVMLVGHNPTMEATLEAMIGEDLLHAALPSGFPTSGLAVLDQDDSAASGKNRWRLIDFLAP 167
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2rflA00 A:4-167      Phosphoglycerate mutase-like                                                                                                                    CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee......-----hhhhh..hhhhhhhhhhhhhhhhhhh....eeee..hhhhhhhhhhhhhhhh--.eeee.hhhh......hhhhhhh.....eeeeee..hhhhhhhhhhhhhhhhhhhh........eeeee.--------...eeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2rfl A   4 SFPTRVYLLRHAKAAW-----RDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFN--IDIVYIDEmYNARSETYLSLIAAQTEVQSVmLVGHNPTmEATLEAmIGEDLLHAALPSGFPTSGLAVLDQ--------NRWRLIDFLAP 167
                                    13     |   - |      33        43        53        63        73  |  |  83   |    93       103     | 113   |   123|      133       143    |    -   |   163    
                                          19    25                                                 76 79      87-MSE               109-MSE 117-MSE  |                     148      157          
                                                                                                                                                  124-MSE

Chain B from PDB  Type:PROTEIN  Length:154
 aligned with A9CJ67_AGRFC | A9CJ67 from UniProtKB/TrEMBL  Length:169

    Alignment length:163
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164   
         A9CJ67_AGRFC     5 FPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFNEGIDIVYIDEMYNARSETYLSLIAAQTEVQSVMLVGHNPTMEATLEAMIGEDLLHAALPSGFPTSGLAVLDQDDSAASGKNRWRLIDFLAP 167
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2rflB00 B:5-167 Phosphoglycerate mutase-like                                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee...........hhhhh..hhhhhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhhhhh-..eeee.hhhh..hhhhhhhhhhh.....eeeeee..hhhhhhhhhhhhhhhhhhhh........eeeee..--------..eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2rfl B   5 FPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFN-GIDIVYIDEmYNARSETYLSLIAAQTEVQSVmLVGHNPTmEATLEAmIGEDLLHAALPSGFPTSGLAVLDQD--------RWRLIDFLAP 167
                                    14        24        34        44        54        64        74 | |    84  |     94       104    |  114  |    124       134       144    |    -   |   164   
                                                                                                  76 |       87-MSE               109-MSE 117-MSE  |                      149      158         
                                                                                                    78                                           124-MSE

Chain C from PDB  Type:PROTEIN  Length:151
 aligned with A9CJ67_AGRFC | A9CJ67 from UniProtKB/TrEMBL  Length:169

    Alignment length:163
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164   
         A9CJ67_AGRFC     5 FPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFNEGIDIVYIDEMYNARSETYLSLIAAQTEVQSVMLVGHNPTMEATLEAMIGEDLLHAALPSGFPTSGLAVLDQDDSAASGKNRWRLIDFLAP 167
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2rflC00 C:5-167 Phosphoglycerate mutase-like                                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee...........hhhhh..hhhhhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhhhh---.eeee.hhhh..hhhhhhhhhhh.....eeeeee..hhhhhhhhhhhhhhhhhhhh........eeeee.---------..eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2rfl C   5 FPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAF---IDIVYIDEmYNARSETYLSLIAAQTEVQSVmLVGHNPTmEATLEAmIGEDLLHAALPSGFPTSGLAVLDQ---------RWRLIDFLAP 167
                                    14        24        34        44        54        64        74|   |   84  |     94       104    |  114  |    124       134       144   |     -   |   164   
                                                                                                 75  79      87-MSE               109-MSE 117-MSE  |                     148       158         
                                                                                                                                                 124-MSE

Chain D from PDB  Type:PROTEIN  Length:147
 aligned with A9CJ67_AGRFC | A9CJ67 from UniProtKB/TrEMBL  Length:169

    Alignment length:165
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163     
         A9CJ67_AGRFC     4 SFPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFNEGIDIVYIDEMYNARSETYLSLIAAQTEVQSVMLVGHNPTMEATLEAMIGEDLLHAALPSGFPTSGLAVLDQDDSAASGKNRWRLIDFLAPG 168
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2rflD00 D:4-16        8 Phosphoglycerate mutase-like                                                                                                                  CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee....--------........hhhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhhhh---.eeee.hhhh......hhhhhhh.....eeeeee..hhhhhhhhhhhhhhhhhhhh........eeeeee.-------..eeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2rfl D   4 SFPTRVYLLRHAKA--------DFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAF---IDIVYIDEmYNARSETYLSLIAAQTEVQSVmLVGHNPTmEATLEAmIGEDLLHAALPSGFPTSGLAVLDQD-------NRWRLIDFLAPG 168
                                    13   |     -  |     33        43        53        63        73 |   |  83   |    93       103     | 113   |   123|      133       143     |   -   |   163     
                                        17       26                                               75  79      87-MSE               109-MSE 117-MSE  |                      149     157           
                                                                                                                                                  124-MSE

Chain E from PDB  Type:PROTEIN  Length:154
 aligned with A9CJ67_AGRFC | A9CJ67 from UniProtKB/TrEMBL  Length:169

    Alignment length:164
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164    
         A9CJ67_AGRFC     5 FPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFNEGIDIVYIDEMYNARSETYLSLIAAQTEVQSVMLVGHNPTMEATLEAMIGEDLLHAALPSGFPTSGLAVLDQDDSAASGKNRWRLIDFLAPG 168
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2rflE00 E:5-168 Phosphoglycerate mutase-like                                                                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee...........hhhhh..hhhhhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhhhh--..eeee.hhhh..hhhhhhhhhhh.....eeeeee..hhhhhhhhhhhhhhhhhhhh........eeeee..--------..eeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2rfl E   5 FPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAF--GIDIVYIDEmYNARSETYLSLIAAQTEVQSVmLVGHNPTmEATLEAmIGEDLLHAALPSGFPTSGLAVLDQD--------RWRLIDFLAPG 168
                                    14        24        34        44        54        64        74|  |    84  |     94       104    |  114  |    124       134       144    |    -   |   164    
                                                                                                 75 78       87-MSE               109-MSE 117-MSE  |                      149      158          
                                                                                                                                                 124-MSE

Chain F from PDB  Type:PROTEIN  Length:147
 aligned with A9CJ67_AGRFC | A9CJ67 from UniProtKB/TrEMBL  Length:169

    Alignment length:163
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163   
         A9CJ67_AGRFC     4 SFPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFNEGIDIVYIDEMYNARSETYLSLIAAQTEVQSVMLVGHNPTMEATLEAMIGEDLLHAALPSGFPTSGLAVLDQDDSAASGKNRWRLIDFLA 166
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2rflF00 F:4-166        Phosphoglycerate mutase-like                                                                                                                 CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee.....-------......hhhhhhhhhhhhhhhhhh.....eeee..hhhhhhhhhhhhhhh--..eeee.hhhh......hhhhhhh.....eeeeee..hhhhhhhhhhhhhhhhhhhh........eeeeee.-------..eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2rfl F   4 SFPTRVYLLRHAKAA-------DFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAF--GIDIVYIDEmYNARSETYLSLIAAQTEVQSVmLVGHNPTmEATLEAmIGEDLLHAALPSGFPTSGLAVLDQD-------NRWRLIDFLA 166
                                    13    |    -  |     33        43        53        63        73 |  |   83   |    93       103     | 113   |   123|      133       143     |   -   |   163   
                                         18      26                                               75 78       87-MSE               109-MSE 117-MSE  |                      149     157         
                                                                                                                                                  124-MSE

Chain G from PDB  Type:PROTEIN  Length:154
 aligned with A9CJ67_AGRFC | A9CJ67 from UniProtKB/TrEMBL  Length:169

    Alignment length:164
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163    
         A9CJ67_AGRFC     4 SFPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFNEGIDIVYIDEMYNARSETYLSLIAAQTEVQSVMLVGHNPTMEATLEAMIGEDLLHAALPSGFPTSGLAVLDQDDSAASGKNRWRLIDFLAP 167
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2rflG00 G:4-167 Phosphoglycerate mutase-like                                                                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee...........hhhhh..hhhhhhhhhhhhhhhhh......eeeee.hhhhhhhhhhhhhhhh-..eeeeehhhh..hhhhhhhhhhh.....eeeeee..hhhhhhhhhhhhhhhhhhhh........eeeee.---------..eeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2rfl G   4 SFPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFN-GIDIVYIDEmYNARSETYLSLIAAQTEVQSVmLVGHNPTmEATLEAmIGEDLLHAALPSGFPTSGLAVLDQ---------RWRLIDFLAP 167
                                    13        23        33        43        53        63        73  | |   83   |    93       103     | 113   |   123|      133       143    |    -    |  163    
                                                                                                   76 |       87-MSE               109-MSE 117-MSE  |                     148       158         
                                                                                                     78                                           124-MSE

Chain H from PDB  Type:PROTEIN  Length:156
 aligned with A9CJ67_AGRFC | A9CJ67 from UniProtKB/TrEMBL  Length:169

    Alignment length:165
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162     
         A9CJ67_AGRFC     3 ASFPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAFNEGIDIVYIDEMYNARSETYLSLIAAQTEVQSVMLVGHNPTMEATLEAMIGEDLLHAALPSGFPTSGLAVLDQDDSAASGKNRWRLIDFLAP 167
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2rflH00 H:3-167 Phosphoglycerate mutase-like                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee...........hhhhh..hhhhhhhhhhhhhhhhhh.....eeeee.hhhhhhhhhhhhhhh---.eeeeehhhh......hhhhhhh.....eeeeee..hhhhhhhhhhhhhhhhhhhh........eeeee..------....eeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2rfl H   3 ASFPTRVYLLRHAKAAWAAPGERDFDRGLNEAGFAEAEIIADLAADRRYRPDLILSSTAARCRQTTQAWQRAF---IDIVYIDEmYNARSETYLSLIAAQTEVQSVmLVGHNPTmEATLEAmIGEDLLHAALPSGFPTSGLAVLDQD------KNRWRLIDFLAP 167
                                    12        22        32        42        52        62        72  |   | 82    |   92       102      |112    |  122 |     132       142      |  -   |   162     
                                                                                                   75  79      87-MSE               109-MSE 117-MSE  |                      149    156           
                                                                                                                                                   124-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2RFL)

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: Phosphoglycerate mutase-like (91)

C58 (Agrobacterium tumefaciens str) (2)

1a	2rflH00	H:3-167
1b	2rflB00	B:5-167
1c	2rflE00	E:5-168
1d	2rflG00	G:4-167
1e	2rflC00	C:5-167
1f	2rflA00	A:4-167
1g	2rflD00	D:4-168
1h	2rflF00	F:4-166

(no "Pfam Domain" information available for 2RFL)

Asymmetric Unit(hide GO term definitions)

(no "Gene Ontology" information available for 2RFL)

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
		ACY	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		GOL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MSE	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		SCN	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Asn A:114 - Pro A:115	[ RasMol ]
		Asn B:114 - Pro B:115	[ RasMol ]
		Asn C:114 - Pro C:115	[ RasMol ]
		Asn D:114 - Pro D:115	[ RasMol ]
		Asn E:114 - Pro E:115	[ RasMol ]
		Asn F:114 - Pro F:115	[ RasMol ]
		Asn G:114 - Pro G:115	[ RasMol ]
		Asn H:114 - Pro H:115	[ RasMol ]
		Phe A:5 - Pro A:6	[ RasMol ]
		Phe B:5 - Pro B:6	[ RasMol ]
		Phe C:5 - Pro C:6	[ RasMol ]
		Phe D:5 - Pro D:6	[ RasMol ]
		Phe E:5 - Pro E:6	[ RasMol ]
		Phe F:5 - Pro F:6	[ RasMol ]
		Phe G:5 - Pro G:6	[ RasMol ]
		Phe H:5 - Pro H:6	[ RasMol ]

Biological Units
	Complete Structure
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	2rfl
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	3.1.3.13
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	5.4.2.1
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(no "Entries Sharing at Least One Protein Chain" available for 2RFL)

(no "Related Entries Specified in the PDB File" available for 2RFL)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 36)

Sites (4, 4)

SS Bonds (0, 0)

Cis Peptide Bonds (16, 16)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

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SCOP Domains (0, 0)

CATH Domains (1, 8)

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Related Entries Specified in the PDB File