Chain A from PDB Type:PROTEIN Length:190
aligned with Q9PDE3_XYLFA | Q9PDE3 from UniProtKB/TrEMBL Length:193
Alignment length:190
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
Q9PDE3_XYLFA 3 HLPVVGEDYVEIPDGRPFAPLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPAVFGGVWDPFARAYLAADVLGVAKRSHTAMFEAIHEKGSVPIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKVRPVGTPTIVVNGRYMVTGHDFEDTLRITDYLVSRERAASHG 192
SCOP domains d2rema_ A: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eee.............eeeeeee...hhhhhhhhhhhhhhhhh....eeeeeee.....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.........hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee...eee...hhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2rem A 4 HLPVVGEDYVEIPDGRPFAPLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPAVFGGVWDPFARAYLAADVLGVAKRSHTAMFEAIHEKGSVPIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKVRPVGTPTIVVNGRYMVTGHDFEDTLRITDYLVSRERAASHG 193
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
Chain B from PDB Type:PROTEIN Length:187
aligned with Q9PDE3_XYLFA | Q9PDE3 from UniProtKB/TrEMBL Length:193
Alignment length:187
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182
Q9PDE3_XYLFA 3 HLPVVGEDYVEIPDGRPFAPLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPAVFGGVWDPFARAYLAADVLGVAKRSHTAMFEAIHEKGSVPIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKVRPVGTPTIVVNGRYMVTGHDFEDTLRITDYLVSRERAA 189
SCOP domains d2remb_ B: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eee.............eeeeeee...hhhhhhhhhhhhhhhhh....eeeeeee.....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.........hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee...eee...hhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2rem B 4 HLPVVGEDYVEIPDGRPFAPLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPAVFGGVWDPFARAYLAADVLGVAKRSHTAMFEAIHEKGSVPIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKVRPVGTPTIVVNGRYMVTGHDFEDTLRITDYLVSRERAA 190
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183
Chain C from PDB Type:PROTEIN Length:191
aligned with Q9PDE3_XYLFA | Q9PDE3 from UniProtKB/TrEMBL Length:193
Alignment length:191
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191
Q9PDE3_XYLFA 2 NHLPVVGEDYVEIPDGRPFAPLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPAVFGGVWDPFARAYLAADVLGVAKRSHTAMFEAIHEKGSVPIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKVRPVGTPTIVVNGRYMVTGHDFEDTLRITDYLVSRERAASHG 192
SCOP domains d2remc_ C: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) --------------------Thioredoxin_4-2remC01 C:23-181 ------------ Pfam domains (1)
Pfam domains (2) --------------------Thioredoxin_4-2remC02 C:23-181 ------------ Pfam domains (2)
Pfam domains (3) --------------------Thioredoxin_4-2remC03 C:23-181 ------------ Pfam domains (3)
Sec.struct. author .........eee.............eeeeeee...hhhhhhhhhhhhhhhhh....eeeeeee.....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.........hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.eeee...eee...hhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2rem C 3 NHLPVVGEDYVEIPDGRPFAPLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPAVFGGVWDPFARAYLAADVLGVAKRSHTAMFEAIHEKGSVPIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKVRPVGTPTIVVNGRYMVTGHDFEDTLRITDYLVSRERAASHG 193
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
Chain T from PDB Type:PROTEIN Length:8
SCOP domains -------- SCOP domains
CATH domains -------- CATH domains
Pfam domains -------- Pfam domains
Sec.struct. author ...ee... Sec.struct. author
SAPs(SNPs) -------- SAPs(SNPs)
PROSITE -------- PROSITE
Transcript -------- Transcript
2rem T 2 xxxxxxxx 9
||||||||
2-UNK|||
3-UNK||
4-UNK|
5-UNK
6-UNK
7-UNK
8-UNK
9-UNK
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |