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(-) Description

Title :  TRANSKETOLASE FROM E. COLI IN COMPLEX WITH SUBSTRATE D-XYLULOSE-5-PHOSPHATE
 
Authors :  G. Wille, P. Asztalos, M. S. Weiss, K. Tittmann
Date :  11 Sep 07  (Deposition) - 11 Dec 07  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.47
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Reaction Intermediate, Calcium, Metal-Binding, Thiamine Pyrophosphate, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  P. Asztalos, C. Parthier, R. Golbik, M. Kleinschmidt, G. Hubner, M. S. Weiss, R. Friedemann, G. Wille, K. Tittmann
Strain And Near Attack Conformers In Enzymic Thiamin Catalysis: X-Ray Crystallographic Snapshots Of Bacterial Transketolase In Covalent Complex With Donor Ketoses Xylulose 5-Phosphate And Fructose 6-Phosphate, And In Noncovalent Complex With Acceptor Aldose Ribose 5-Phosphate.
Biochemistry V. 46 12037 2007
PubMed-ID: 17914867  |  Reference-DOI: 10.1021/BI700844M
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - TRANSKETOLASE 1
    ChainsA, B
    EC Number2.2.1.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainJM109
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneTKTA, TKT
    Organism ScientificESCHERICHIA COLI K12
    Organism Taxid83333
    StrainK-12
    SynonymTK 1

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 15)

Asymmetric/Biological Unit (3, 15)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION
2EDO11Ligand/Ion1,2-ETHANEDIOL
3T5X2Ligand/Ion2-C-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-(2-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-2-YL}-5-O-PHOSPHONO-D-XYLITOL

(-) Sites  (15, 15)

Asymmetric Unit (15, 15)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:155 , ASN A:185 , ILE A:187 , T5X A:671 , HOH A:680BINDING SITE FOR RESIDUE CA A 670
02AC2SOFTWAREASP B:155 , ASN B:185 , ILE B:187 , T5X B:671 , HOH B:730BINDING SITE FOR RESIDUE CA B 670
03AC3SOFTWAREHIS A:26 , ALA A:29 , HIS A:66 , HIS A:100 , GLY A:114 , LEU A:116 , ASP A:155 , GLY A:156 , GLU A:160 , ASN A:185 , ILE A:187 , ILE A:189 , ILE A:247 , HIS A:261 , CA A:670 , HOH A:677 , HOH A:680 , HOH A:681 , HOH A:682 , HOH A:687 , HOH A:691 , HOH A:697 , HOH A:703 , HOH A:747 , HOH A:793 , ASP B:381 , SER B:385 , GLU B:411 , PHE B:434 , PHE B:437 , TYR B:440 , HIS B:461 , ASP B:469 , HIS B:473 , ARG B:520 , HOH B:1232BINDING SITE FOR RESIDUE T5X A 671
04AC4SOFTWAREASP A:381 , SER A:385 , GLU A:411 , PHE A:434 , PHE A:437 , TYR A:440 , HIS A:461 , ASP A:469 , HIS A:473 , ARG A:520 , HOH A:700 , HOH A:943 , HIS B:26 , ALA B:29 , HIS B:66 , HIS B:100 , GLY B:114 , LEU B:116 , ASP B:155 , GLY B:156 , GLU B:160 , ASN B:185 , ILE B:187 , ILE B:189 , ILE B:247 , HIS B:261 , CA B:670 , HOH B:682 , HOH B:690 , HOH B:693 , HOH B:695 , HOH B:699 , HOH B:736 , HOH B:763 , HOH B:1252BINDING SITE FOR RESIDUE T5X B 671
05AC5SOFTWAREGLU B:6 , GLY B:278 , TRP B:279 , LYS B:280 , TYR B:281 , HOH B:913 , HOH B:1215BINDING SITE FOR RESIDUE EDO B 672
06AC6SOFTWAREALA B:271 , TYR B:505 , GLU B:508 , ARG B:509 , HOH B:783 , HOH B:816BINDING SITE FOR RESIDUE EDO B 673
07AC7SOFTWAREARG B:274 , GLU B:275 , TRP B:279 , GLN B:592 , HOH B:822 , HOH B:1124 , HOH B:1224BINDING SITE FOR RESIDUE EDO B 674
08AC8SOFTWARELEU B:272 , GLU B:275 , ARG B:509 , ASP B:511 , HOH B:1103BINDING SITE FOR RESIDUE EDO B 675
09AC9SOFTWAREPHE B:375 , TRP B:390 , SER B:393 , ASN B:403 , TYR B:404 , TYR B:430BINDING SITE FOR RESIDUE EDO B 676
10BC1SOFTWAREPRO B:52 , GLY B:108 , VAL B:109BINDING SITE FOR RESIDUE EDO B 677
11BC2SOFTWAREILE A:615 , ASP A:617 , THR A:633 , HOH A:898 , ARG B:483 , HOH B:906BINDING SITE FOR RESIDUE EDO A 672
12BC3SOFTWARESER B:559 , GLU B:560 , PHE B:645 , PHE B:650 , HOH B:917 , HOH B:1088BINDING SITE FOR RESIDUE EDO B 678
13BC4SOFTWARELYS B:131 , THR B:172 , LYS B:174 , ASN B:397 , HOH B:842 , HOH B:1094BINDING SITE FOR RESIDUE EDO B 679
14BC5SOFTWARELEU B:435 , ASP B:462 , PRO B:475 , VAL B:479 , ARG B:492 , ALA B:613 , GLY B:614 , HOH B:752BINDING SITE FOR RESIDUE EDO B 680
15BC6SOFTWAREPHE B:325 , THR B:326 , HOH B:881BINDING SITE FOR RESIDUE EDO B 681

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2R8O)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2R8O)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2R8O)

(-) PROSITE Motifs  (2, 4)

Asymmetric/Biological Unit (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TRANSKETOLASE_1PS00801 Transketolase signature 1.TKT1_ECOLI12-32
 
  2A:12-32
B:12-32
2TRANSKETOLASE_2PS00802 Transketolase signature 2.TKT1_ECOLI467-483
 
  2A:467-483
B:467-483

(-) Exons   (0, 0)

(no "Exon" information available for 2R8O)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:662
 aligned with TKT1_ECOLI | P27302 from UniProtKB/Swiss-Prot  Length:663

    Alignment length:662
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661  
           TKT1_ECOLI     2 SSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL 663
               SCOP domains d2r8oa2 A:2-332 Transketolase (TK), PP module                                                                                                                                                                                                                                                                                              d2r8oa1 A:333-527 automated matches                                                                                                                                                                d2r8oa3 A:528-663 Transketolase (TK), C-domain                                                                                           SCOP domains
               CATH domains 2r8oA01 A:2-326  [code=3.40.50.970, no name defined]                                                                                                                                                                                                                                                                                 2r8oA02 A:327-537  [code=3.40.50.970, no name defined]                                                                                                                                                             2r8oA03 A:538-663  [code=3.40.50.920, no name defined]                                                                         CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh..............eeee.hhhhhhhhhhhhhhhh...hhhhhh............................hhhhhhhhhhhhhhhhhhhhhh..........eeeeehhhhhhhhhhhhhhhhhhhh....eeeeeee..ee..ee.hhh...hhhhhhhhh..eeeeeee..hhhhhhhhhhhhhhh....eeeeee............hhhhh....hhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh.....eeeee..hhhhhh................eee...hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhhhhhhhhhh....eeeee..hhhhh.........hhhhhhhh....eee...hhhhhhhhhhhhhhh....eeee....ee.....hhhhhhhhhhh.eeee.......eeeee...hhhhhhhhhhhhhhhh..eeeee..hhhhhhh.hhhhhhhhh......eeeeeeee...hhhhhh...eeeee.......hhhhhhhhh..hhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------TRANSKETOLASE_1      --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRANSKETOLASE_2  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2r8o A   2 SSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL 663
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661  

Chain B from PDB  Type:PROTEIN  Length:667
 aligned with TKT1_ECOLI | P27302 from UniProtKB/Swiss-Prot  Length:663

    Alignment length:667
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               663     
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661 |     
           TKT1_ECOLI     2 SSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL-----   -
               SCOP domains d2r8ob2 B:2-332 Transketolase (TK), PP module                                                                                                                                                                                                                                                                                              d2r8ob1 B:333-527 automated matches                                                                                                                                                                d2r8ob3 B:528-668 Transketolase (TK), C-domain                                                                                                SCOP domains
               CATH domains 2r8oB01 B:2-326  [code=3.40.50.970, no name defined]                                                                                                                                                                                                                                                                                 2r8oB02 B:327-537  [code=3.40.50.970, no name defined]                                                                                                                                                             2r8oB03 B:538-668  [code=3.40.50.920, no name defined]                                                                              CATH domains
           Pfam domains (1) -Transketolase_N-2r8oB03 B:3-334                                                                                                                                                                                                                                                                                                             ------------------Transket_pyr-2r8oB01 B:353-526                                                                                                                                                -------------Transketolase_C-2r8oB05 B:540-655                                                                                   ------------- Pfam domains (1)
           Pfam domains (2) -Transketolase_N-2r8oB04 B:3-334                                                                                                                                                                                                                                                                                                             ------------------Transket_pyr-2r8oB02 B:353-526                                                                                                                                                -------------Transketolase_C-2r8oB06 B:540-655                                                                                   ------------- Pfam domains (2)
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh..............eeee.hhhhhhhhhhhhhhhh...hhhhhh............................hhhhhhhhhhhhhhhhhhhhhh..........eeeeehhhhhhhhhhhhhhhhhhhh....eeeeeee..ee..ee.hhh...hhhhhhhhh..eeeeeee..hhhhhhhhhhhhhhh....eeeeee............hhhhh....hhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh...eehhhhhhhhhhhhh.....eeeee..hhhhhh................eee...hhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhhhhhhhhhh....eeeee..hhhhh.........hhhhhhhh....eee...hhhhhhhhhhhhhhh....eeee....ee.....hhhhhhhhhhh.eeee.......eeeee...hhhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhhh......eeeeeeee...hhhhhh...eeeee.......hhhhhhhhh..hhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------TRANSKETOLASE_1      --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRANSKETOLASE_2  ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2r8o B   2 SSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELLHHHHH 668
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 6)

Asymmetric/Biological Unit

(-) CATH Domains  (2, 6)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (3, 6)

Asymmetric/Biological Unit

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (TKT1_ECOLI | P27302)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0030145    manganese ion binding    Interacting selectively and non-covalently with manganese (Mn) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0030976    thiamine pyrophosphate binding    Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0004802    transketolase activity    Catalysis of the reversible transfer of a 2-carbon ketol group (CH2OH-CO-) from a ketose phosphate donor to an aldose phosphate acceptor.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0009052    pentose-phosphate shunt, non-oxidative branch    The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TKT1_ECOLI | P273021qgd 2r5n 2r8p 5hht

(-) Related Entries Specified in the PDB File

1qgd ENZYME WITHOUT SUBSTRATE
2r5n
2r8p