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(-) Description

Title :  CRYSTAL STRUCTURE OF PUTATIVE ACETYLTRANSFERASE (YP_831484.1) FROM ARTHROBACTER SP. FB24 AT 1.65 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  22 Aug 07  (Deposition) - 11 Sep 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.65
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Yp_831484. 1, Putative Acetyltransferase, Arthrobacter Sp. Fb24, Acetyltransferase (Gnat) Family, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Putative Acetyltransferase (Yp_831484. 1) From Arthrobacter Sp. Fb24 At 1. 65 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - GCN5-RELATED N-ACETYLTRANSFERASE
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: YP_831484.1, ARTH_2003
    Organism Scientific: ARTHROBACTER SP.
    Organism Taxid: 290399
    Strain: FB24

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 18)

Asymmetric/Biological Unit (4, 18)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2EDO7Ligand/Ion1,2-ETHANEDIOL
3GOL6Ligand/IonGLYCEROL
4MSE4Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:141 , THR A:142 , ASP A:143BINDING SITE FOR RESIDUE CL A 172
02AC2SOFTWAREPRO B:49 , GLY B:107 , ARG B:108BINDING SITE FOR RESIDUE EDO B 172
03AC3SOFTWAREGLY A:152 , THR A:154 , TYR B:168 , ARG B:169 , GLU B:170 , EDO B:174BINDING SITE FOR RESIDUE EDO B 173
04AC4SOFTWAREARG A:169 , ARG B:126 , GLU B:170 , EDO B:173 , HOH B:285BINDING SITE FOR RESIDUE EDO B 174
05AC5SOFTWAREEDO A:175 , ARG B:126 , GLY B:129BINDING SITE FOR RESIDUE EDO B 175
06AC6SOFTWARETYR A:168 , ARG A:169 , GLU A:170 , GLY B:152 , THR B:154BINDING SITE FOR RESIDUE EDO A 173
07AC7SOFTWAREGLY A:94 , ARG A:128 , GLY A:129BINDING SITE FOR RESIDUE EDO A 174
08AC8SOFTWARELEU A:171 , HOH A:236 , ARG B:126 , GLY B:129 , GLY B:130 , EDO B:175BINDING SITE FOR RESIDUE EDO A 175
09AC9SOFTWARETHR B:44 , GLU B:45 , HIS B:111 , ARG B:146 , PHE B:147 , ALA B:150 , ARG B:151 , HOH B:224 , HOH B:252 , HOH B:345BINDING SITE FOR RESIDUE GOL B 176
10BC1SOFTWAREHOH A:265 , ASN B:89 , TYR B:92 , GLU B:134 , HOH B:192 , HOH B:307 , HOH B:339BINDING SITE FOR RESIDUE GOL B 177
11BC2SOFTWAREASN A:43 , PRO A:49BINDING SITE FOR RESIDUE GOL A 176
12BC3SOFTWARELEU A:132 , GLU A:157 , MSE A:164 , TYR B:166 , TYR B:168 , GLU B:170BINDING SITE FOR RESIDUE GOL A 177
13BC4SOFTWARELEU B:99 , ASP B:100 , GLU B:101 , ILE B:135 , ASN B:136 , TYR B:148 , HOH B:193 , HOH B:351BINDING SITE FOR RESIDUE GOL B 178
14BC5SOFTWARETRP A:91 , ASN B:43 , PRO B:49 , HOH B:304 , HOH B:323BINDING SITE FOR RESIDUE GOL B 179

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2R1I)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Glu A:76 -Pro A:77
2Glu B:76 -Pro B:77

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2R1I)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2R1I)

(-) Exons   (0, 0)

(no "Exon" information available for 2R1I)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:156
 aligned with A0JWG4_ARTS2 | A0JWG4 from UniProtKB/TrEMBL  Length:171

    Alignment length:156
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165      
         A0JWG4_ARTS2    16 DDSASVEVPRRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVLSFRPNVWYPGPVAILDELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEARGFTNTEPNGTEPMLYYYREL 171
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains -------2r1iA01 A:23-152  [code=3.40.630.30, no name defined]                                                                             ------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........ee.hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh....eeeeee.....eeeeeeee........eeeeeeee...hhhhhhhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhh.............eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2r1i A  16 DDSASVEVPRRATPADAATVAQmLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVLSFRPNVWYPGPVAILDELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEARGFTNTEPNGTEPmLYYYREL 171
                                    25        35  |     45        55        65        75        85        95       105       115       125       135       145       155       165      
                                                 38-MSE                                                                                                                       164-MSE   


Chain B from PDB  Type:PROTEIN  Length:156
 aligned with A0JWG4_ARTS2 | A0JWG4 from UniProtKB/TrEMBL  Length:171

    Alignment length:156
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165      
         A0JWG4_ARTS2    16 DDSASVEVPRRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVLSFRPNVWYPGPVAILDELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEARGFTNTEPNGTEPMLYYYREL 171
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains -------2r1iB01 B:23-152  [code=3.40.630.30, no name defined]                                                                             ------------------- CATH domains
           Pfam domains (1) --------------------------------------------------Acetyltransf_1-2r1iB01 B:66-154                                                          ----------------- Pfam domains (1)
           Pfam domains (2) --------------------------------------------------Acetyltransf_1-2r1iB02 B:66-154                                                          ----------------- Pfam domains (2)
         Sec.struct. author .........ee.hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh....eeeeee.....eeeeeeee........eeeeeeee...hhhhhhhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhh.............eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2r1i B  16 DDSASVEVPRRATPADAATVAQmLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVLSFRPNVWYPGPVAILDELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEARGFTNTEPNGTEPmLYYYREL 171
                                    25        35  |     45        55        65        75        85        95       105       115       125       135       145       155       165      
                                                 38-MSE                                                                                                                       164-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2R1I)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Clan: Acetyltrans (109)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (A0JWG4_ARTS2 | A0JWG4)
molecular function
    GO:0008080    N-acetyltransferase activity    Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

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