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(-) Description

Title :  SECRETED ASPARTIC PROTEINASE (SAP) 1 FROM CANDIDA ALBICANS
 
Authors :  E. Ruge, C. Borelli, K. Maskos, R. Huber
Date :  17 Aug 07  (Deposition) - 08 Jul 08  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.05
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Aspartic Proteinase, Candida Albicans, Aspartyl Protease, Cleavage On Pair Of Basic Residues, Glycoprotein, Hydrolase, Protease, Secreted, Zymogen (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Borelli, E. Ruge, J. H. Lee, M. Schaller, A. Vogelsang, M. Monod, H. C. Korting, R. Huber, K. Maskos
X-Ray Structures Of Sap1 And Sap5: Structural Comparison Of The Secreted Aspartic Proteinases From Candida Albicans.
Proteins V. 72 1308 2008
PubMed-ID: 18384081  |  Reference-DOI: 10.1002/PROT.22021
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CANDIDAPEPSIN-1
    Chains: A, B
    EC Number: 3.4.23.24
    Engineered: YES
    Expression System: PICHIA PASTORIS
    Organism Common: YEAST
    Organism Scientific: CANDIDA ALBICANS
    Synonym: ASPARTATE PROTEASE 1, ACP 1, SECRETED ASPARTIC PROTEASE 1

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2QZW)

(-) Sites  (0, 0)

(no "Site" information available for 2QZW)

(-) SS Bonds  (4, 4)

Asymmetric Unit
No.Residues
1A:47 -A:59
2A:256 -A:294
3B:47 -B:59
4B:256 -B:294

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2QZW)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (5, 10)

Asymmetric Unit (5, 10)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_CARP1_CANAX_001 *I53LCARP1_CANAX  ---  ---A/BI3L
2UniProtVAR_CARP1_CANAX_002 *L61HCARP1_CANAX  ---  ---A/BH11H
3UniProtVAR_CARP1_CANAX_003 *S128TCARP1_CANAX  ---  ---A/BT78T
4UniProtVAR_CARP1_CANAW_001 *Y131NCARP1_CANAW  ---  ---A/BY81N
5UniProtVAR_CARP1_CANAW_002 *V319ACARP1_CANAW  ---  ---A/BA270A
   * ID not provided by source
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (5, 5)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_CARP1_CANAX_001 *I53LCARP1_CANAX  ---  ---AI3L
2UniProtVAR_CARP1_CANAX_002 *L61HCARP1_CANAX  ---  ---AH11H
3UniProtVAR_CARP1_CANAX_003 *S128TCARP1_CANAX  ---  ---AT78T
4UniProtVAR_CARP1_CANAW_001 *Y131NCARP1_CANAW  ---  ---AY81N
5UniProtVAR_CARP1_CANAW_002 *V319ACARP1_CANAW  ---  ---AA270A
   * ID not provided by source
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (5, 5)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_CARP1_CANAX_001 *I53LCARP1_CANAX  ---  ---BI3L
2UniProtVAR_CARP1_CANAX_002 *L61HCARP1_CANAX  ---  ---BH11H
3UniProtVAR_CARP1_CANAX_003 *S128TCARP1_CANAX  ---  ---BT78T
4UniProtVAR_CARP1_CANAW_001 *Y131NCARP1_CANAW  ---  ---BY81N
5UniProtVAR_CARP1_CANAW_002 *V319ACARP1_CANAW  ---  ---BA270A
   * ID not provided by source
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (2, 6)

Asymmetric Unit (2, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEPTIDASE_A1PS51767 Peptidase family A1 domain profile.CARP1_CANAL64-377
 		  2A:14-328
B:14-328
CARP1_CANAW64-377
 		  2A:14-328
B:14-328
CARP1_CANAX64-377
 		  2A:14-328
B:14-328
2ASP_PROTEASEPS00141 Eukaryotic and viral aspartyl proteases active site.CARP1_CANAL79-90
 
264-275
 		  4A:29-40
B:29-40
A:215-226
B:215-226
CARP1_CANAW79-90
 
264-275
 		  4A:29-40
B:29-40
A:215-226
B:215-226
CARP1_CANAX79-90
 
264-275
 		  4A:29-40
B:29-40
A:215-226
B:215-226
Biological Unit 1 (2, 9)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEPTIDASE_A1PS51767 Peptidase family A1 domain profile.CARP1_CANAL64-377
 		  1A:14-328
-
CARP1_CANAW64-377
 		  1A:14-328
-
CARP1_CANAX64-377
 		  1A:14-328
-
2ASP_PROTEASEPS00141 Eukaryotic and viral aspartyl proteases active site.CARP1_CANAL79-90
 
264-275
 		  2A:29-40
-
A:215-226
-
CARP1_CANAW79-90
 
264-275
 		  2A:29-40
-
A:215-226
-
CARP1_CANAX79-90
 
264-275
 		  2A:29-40
-
A:215-226
-
Biological Unit 2 (2, 9)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PEPTIDASE_A1PS51767 Peptidase family A1 domain profile.CARP1_CANAL64-377
 		  1-
B:14-328
CARP1_CANAW64-377
 		  1-
B:14-328
CARP1_CANAX64-377
 		  1-
B:14-328
2ASP_PROTEASEPS00141 Eukaryotic and viral aspartyl proteases active site.CARP1_CANAL79-90
 
264-275
 		  2-
B:29-40
-
B:215-226
CARP1_CANAW79-90
 
264-275
 		  2-
B:29-40
-
B:215-226
CARP1_CANAX79-90
 
264-275
 		  2-
B:29-40
-
B:215-226

(-) Exons   (0, 0)

(no "Exon" information available for 2QZW)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:341
 aligned with CARP1_CANAL | P0CY27 from UniProtKB/Swiss-Prot  Length:391

    Alignment length:341
                                    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390 
          CARP1_CANAL    51 QAIPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNAKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 391
               SCOP domains d2qzwa_ A: automated matches                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains 2qzwA01 A:1-172 Acid Proteases                                                                                                                                              2qzwA02 A:173-342 Acid Proteases                                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee....eeeeeee....eeeeeeee.....eeeeeeeeee..................hhhhh...eeeeeeeeee.....eeeeeeeeeeeee..eeeeeeeeeeeeee.....eee..hhhhh......hhhhhhhhh......eeeee.......eeeeee.eee........eeee.......eeeeeeeee..eeeeeeeeeee......eeehhhhhhhhhhhhh.eee.......eeee......eeeeee....eeeee....ee............eee.eee....eehhhhhh.eeeeee....eeeeee........eee.. Sec.struct. author
                 SAPs(SNPs) --L-------H------------------------------------------------------------------T--N-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------PEPTIDASE_A1  PDB: A:14-328 UniProt: 64-377                                                                                                                                                                                                                                                                               -------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ----------------------------ASP_PROTEASE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASP_PROTEASE-------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qzw A   1 QAIPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNAKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 342
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210|      221       231       241       251       261       271       281       291       301       311       321       331       341 
                                                                                                                                                                                                                                           210|                                                                                                                                  
                                                                                                                                                                                                                                            212                                                                                                                                  


Chain A from PDB  Type:PROTEIN  Length:341
 aligned with CARP1_CANAW | C4YSF6 from UniProtKB/Swiss-Prot  Length:391

    Alignment length:341
                                    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390 
          CARP1_CANAW    51 QALPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNVKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 391
               SCOP domains d2qzwa_ A: automated matches                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains 2qzwA01 A:1-172 Acid Proteases                                                                                                                                              2qzwA02 A:173-342 Acid Proteases                                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee....eeeeeee....eeeeeeee.....eeeeeeeeee..................hhhhh...eeeeeeeeee.....eeeeeeeeeeeee..eeeeeeeeeeeeee.....eee..hhhhh......hhhhhhhhh......eeeee.......eeeeee.eee........eeee.......eeeeeeeee..eeeeeeeeeee......eeehhhhhhhhhhhhh.eee.......eeee......eeeeee....eeeee....ee............eee.eee....eehhhhhh.eeeeee....eeeeee........eee.. Sec.struct. author
                 SAPs(SNPs) --L-------H------------------------------------------------------------------T--N-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) -------------PEPTIDASE_A1  PDB: A:14-328 UniProt: 64-377                                                                                                                                                                                                                                                                               -------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------ASP_PROTEASE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASP_PROTEASE-------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qzw A   1 QAIPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNAKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 342
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210|      221       231       241       251       261       271       281       291       301       311       321       331       341 
                                                                                                                                                                                                                                           210|                                                                                                                                  
                                                                                                                                                                                                                                            212                                                                                                                                  


Chain A from PDB  Type:PROTEIN  Length:341
 aligned with CARP1_CANAX | P0CY26 from UniProtKB/Swiss-Prot  Length:391

    Alignment length:341
                                    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390 
          CARP1_CANAX    51 QAIPVTLNNELVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGSPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNAKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 391
               SCOP domains d2qzwa_ A: automated matches                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains 2qzwA01 A:1-172 Acid Proteases                                                                                                                                              2qzwA02 A:173-342 Acid Proteases                                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee....eeeeeee....eeeeeeee.....eeeeeeeeee..................hhhhh...eeeeeeeeee.....eeeeeeeeeeeee..eeeeeeeeeeeeee.....eee..hhhhh......hhhhhhhhh......eeeee.......eeeeee.eee........eeee.......eeeeeeeee..eeeeeeeeeee......eeehhhhhhhhhhhhh.eee.......eeee......eeeeee....eeeee....ee............eee.eee....eehhhhhh.eeeeee....eeeeee........eee.. Sec.struct. author
                 SAPs(SNPs) --L-------H------------------------------------------------------------------T--N-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -------------PEPTIDASE_A1  PDB: A:14-328 UniProt: 64-377                                                                                                                                                                                                                                                                               -------------- PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ----------------------------ASP_PROTEASE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASP_PROTEASE-------------------------------------------------------------------------------------------------------------------- PROSITE (6)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qzw A   1 QAIPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNAKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 342
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210|      221       231       241       251       261       271       281       291       301       311       321       331       341 
                                                                                                                                                                                                                                           210|                                                                                                                                  
                                                                                                                                                                                                                                            212                                                                                                                                  


Chain B from PDB  Type:PROTEIN  Length:341
 aligned with CARP1_CANAL | P0CY27 from UniProtKB/Swiss-Prot  Length:391

    Alignment length:341
                                    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390 
          CARP1_CANAL    51 QAIPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNAKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 391
               SCOP domains d2qzwb_ B: automated matches                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains 2qzwB01 B:1-172 Acid Proteases                                                                                                                                              2qzwB02 B:173-342 Acid Proteases                                                                                                                                          CATH domains
           Pfam domains (1) ------------Asp-2qzwB01 B:13-330                                                                                                                                                                                                                                                                                                         ------------ Pfam domains (1)
           Pfam domains (2) ------------Asp-2qzwB02 B:13-330                                                                                                                                                                                                                                                                                                         ------------ Pfam domains (2)
         Sec.struct. author ..eeeeeee....eeeeeee....eeeeeeee.....eeeeeeeeee..................hhhhh...eeeeeeeeee.....eeeeeeeeeeeee..eeeeeeeeeeeeee.....eee..hhhhh......hhhhhhhhh......eeeee.......eeeeee.eee........eeee.......eeeeeeeee..eeeeeeeeeee......eeehhhhhhhhhhhhh.eeee.....eeeee......eeeeee....eeeee....eeeee.....eeeeeee.eee....eehhhhhh.eeeeee....eeeeee........eee.. Sec.struct. author
                 SAPs(SNPs) --L-------H------------------------------------------------------------------T--N-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) -------------PEPTIDASE_A1  PDB: B:14-328 UniProt: 64-377                                                                                                                                                                                                                                                                               -------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ----------------------------ASP_PROTEASE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASP_PROTEASE-------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qzw B   1 QAIPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNAKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 342
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210|      221       231       241       251       261       271       281       291       301       311       321       331       341 
                                                                                                                                                                                                                                           210|                                                                                                                                  
                                                                                                                                                                                                                                            212                                                                                                                                  


Chain B from PDB  Type:PROTEIN  Length:341
 aligned with CARP1_CANAW | C4YSF6 from UniProtKB/Swiss-Prot  Length:391

    Alignment length:341
                                    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390 
          CARP1_CANAW    51 QALPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNVKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 391
               SCOP domains d2qzwb_ B: automated matches                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains 2qzwB01 B:1-172 Acid Proteases                                                                                                                                              2qzwB02 B:173-342 Acid Proteases                                                                                                                                          CATH domains
           Pfam domains (1) ------------Asp-2qzwB01 B:13-330                                                                                                                                                                                                                                                                                                         ------------ Pfam domains (1)
           Pfam domains (2) ------------Asp-2qzwB02 B:13-330                                                                                                                                                                                                                                                                                                         ------------ Pfam domains (2)
         Sec.struct. author ..eeeeeee....eeeeeee....eeeeeeee.....eeeeeeeeee..................hhhhh...eeeeeeeeee.....eeeeeeeeeeeee..eeeeeeeeeeeeee.....eee..hhhhh......hhhhhhhhh......eeeee.......eeeeee.eee........eeee.......eeeeeeeee..eeeeeeeeeee......eeehhhhhhhhhhhhh.eeee.....eeeee......eeeeee....eeeee....eeeee.....eeeeeee.eee....eehhhhhh.eeeeee....eeeeee........eee.. Sec.struct. author
                 SAPs(SNPs) --L-------H------------------------------------------------------------------T--N-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (2) -------------PEPTIDASE_A1  PDB: B:14-328 UniProt: 64-377                                                                                                                                                                                                                                                                               -------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------ASP_PROTEASE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASP_PROTEASE-------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qzw B   1 QAIPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNAKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 342
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210|      221       231       241       251       261       271       281       291       301       311       321       331       341 
                                                                                                                                                                                                                                           210|                                                                                                                                  
                                                                                                                                                                                                                                            212                                                                                                                                  


Chain B from PDB  Type:PROTEIN  Length:341
 aligned with CARP1_CANAX | P0CY26 from UniProtKB/Swiss-Prot  Length:391

    Alignment length:341
                                    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390 
          CARP1_CANAX    51 QAIPVTLNNELVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGSPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNAKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 391
               SCOP domains d2qzwb_ B: automated matches                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains 2qzwB01 B:1-172 Acid Proteases                                                                                                                                              2qzwB02 B:173-342 Acid Proteases                                                                                                                                          CATH domains
           Pfam domains (1) ------------Asp-2qzwB01 B:13-330                                                                                                                                                                                                                                                                                                         ------------ Pfam domains (1)
           Pfam domains (2) ------------Asp-2qzwB02 B:13-330                                                                                                                                                                                                                                                                                                         ------------ Pfam domains (2)
         Sec.struct. author ..eeeeeee....eeeeeee....eeeeeeee.....eeeeeeeeee..................hhhhh...eeeeeeeeee.....eeeeeeeeeeeee..eeeeeeeeeeeeee.....eee..hhhhh......hhhhhhhhh......eeeee.......eeeeee.eee........eeee.......eeeeeeeee..eeeeeeeeeee......eeehhhhhhhhhhhhh.eeee.....eeeee......eeeeee....eeeee....eeeee.....eeeeeee.eee....eehhhhhh.eeeeee....eeeeee........eee.. Sec.struct. author
                 SAPs(SNPs) --L-------H------------------------------------------------------------------T--N-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) -------------PEPTIDASE_A1  PDB: B:14-328 UniProt: 64-377                                                                                                                                                                                                                                                                               -------------- PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
                PROSITE (4) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
                PROSITE (5) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
                PROSITE (6) ----------------------------ASP_PROTEASE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASP_PROTEASE-------------------------------------------------------------------------------------------------------------------- PROSITE (6)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qzw B   1 QAIPVTLNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKPRPGQSADFCKGKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQGVIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNINGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNNAKISVPASEFTAPLSYANGQPYPKCQLLLGISDANILGDNFLRSAYLVYDLDDDKISLAQVKYTSASNIAALT 342
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210|      221       231       241       251       261       271       281       291       301       311       321       331       341 
                                                                                                                                                                                                                                           210|                                                                                                                                  
                                                                                                                                                                                                                                            212
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 2)

Asymmetric Unit
(-)
Clan: Peptidase_AA (368)
(-)
Family: Asp (155)

(-) Gene Ontology  (14, 24)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (CARP1_CANAL | P0CY27)
molecular function
    GO:0004190    aspartic-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
biological process
    GO:0044406    adhesion of symbiont to host    The attachment of a symbiont to its host via adhesion molecules, general stickiness etc., either directly or indirectly. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0052391    induction by symbiont of defense-related host calcium ion flux    The activation by an organism of a flux of calcium ions that occurs as part of the defense response of a host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0044416    induction by symbiont of host defense response    The activation by an organism of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0052559    induction by symbiont of host immune response    Any process in which an organism activates the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0006807    nitrogen compound metabolic process    The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
    GO:0030163    protein catabolic process    The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
    GO:0019538    protein metabolic process    The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
    GO:0006465    signal peptide processing    The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Chain A,B   (CARP1_CANAX | P0CY26)
molecular function
    GO:0004190    aspartic-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
biological process
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Chain A,B   (CARP1_CANAW | C4YSF6)
molecular function
    GO:0004190    aspartic-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
biological process
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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  2qzw
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 Related Entries

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(-) Related Entries Specified in the PDB File

2qzx