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(-) Description

Title :  STRUCTURE OF THE C-TERMINAL DOMAIN OF SEX PHEROMONE STAPH-CAM373 PRECURSOR FROM STAPHYLOCOCCUS AUREUS
 
Authors :  M. E. Cuff, K. Mussar, C. Hatzos, M. Gu, A. Joachimiak, Midwest Center Structural Genomics (Mcsg)
Date :  10 Aug 07  (Deposition) - 11 Sep 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Staphylococcus Aureus, Sex Pheromone Staph-Cam373 Precursor, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. E. Cuff, K. Mussar, C. Hatzos, M. Gu, A. Joachimiak
Structure Of The C-Terminal Domain Of Sex Pheromone Staph-Cam373 Precursor From Staphylococcus Aureus.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SEX PHEROMONE STAPH-CAM373
    Atcc: 700699
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 59-399
    Gene: CAMS, SAV1903
    Organism Scientific: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS
    Organism Taxid: 158878
    Strain: MU50

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 10)

Asymmetric/Biological Unit (2, 10)
No.NameCountTypeFull Name
1EDO5Ligand/Ion1,2-ETHANEDIOL
2MSE5Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:79 , GLU A:83 , ASN A:167 , HOH A:436 , HOH A:501 , HOH A:551BINDING SITE FOR RESIDUE EDO A 1
2AC2SOFTWAREVAL A:93 , PRO A:242 , GLU A:268 , LYS A:269 , HOH A:654 , HOH A:681BINDING SITE FOR RESIDUE EDO A 400
3AC3SOFTWAREARG A:231 , ASN A:235 , HOH A:474 , HOH A:626 , HOH A:707BINDING SITE FOR RESIDUE EDO A 401
4AC4SOFTWAREGLU A:83 , TYR A:343 , ARG A:380 , ASN A:399 , HOH A:466 , HOH A:576BINDING SITE FOR RESIDUE EDO A 402
5AC5SOFTWARELYS A:98 , GLY A:175 , LYS A:185BINDING SITE FOR RESIDUE EDO A 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2QX2)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Leu A:287 -Pro A:288

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2QX2)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:318
 aligned with A0A0H3JSC0_S | A0A0H3JSC0 from UniProtKB/TrEMBL  Length:399

    Alignment length:332
                                    77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397  
         A0A0H3JSC0_S    68 LLQDNMANSYNGGDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENLGLNPSHEGETNPEKIAEKSPAYLSNILEQDFYGGGDTKGKNIKGMTIGLAMNSVYYYKKEKDGPTFSKKLDDSEVKKQGKQMASEILSRLRENDDLKDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNEWHNINEKSALLPSSTAADYDENLNNNFKQFNDNLQSYFSNFTQAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEPQVHIYSN 399
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2qx2A00 A:68-399 sex pheromone staph- cam373 precursor domain                                                                                                                                                                                                                                                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhh.....eeee....hhhhhhhhhh...hhhhhhh.hhhhhhhh................hhhhhhhhh...eeeeeeeeee.------....eeeeeeee..eeee........eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeee..........eeeeeeee.......-..ee..eeeeee.hhhhhhhhhhhhhhhhhhhhhh.-------..eeeeeee..eeeeeeeeee....hhhhhhhhhhhhhhhhhhhh.....eeeeee....eeeeeee.......eeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qx2 A  68 LLQDNmANSYNGGDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNPKYTKREIDKmSEKDKKDKKANENLGLNPSHEGETNPEKIAEKSPAYLSNILEQDFYG------KNIKGmTIGLAmNSVYYYKKEKDGPTFSKKLDDSEVKKQGKQmASEILSRLRENDDLKDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKL-EWHNINEKSALLPSSTAADYDENLNNNFKQFNDNLQ-------QAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEPQVHIYSN 399
                                 |  77        87        97       107       117       127|      137       147       157       167       | -    |  187     | 197       207       217      |227       237       247       257       267      |277       287       297       307   |     - |     327       337       347       357       367       377       387       397  
                                 |                                                    128-MSE                                        175    182    |     |                            224-MSE                                           274 |                                311     319                                                                                
                                73-MSE                                                                                                           187-MSE |                                                                                276                                                                                                                           
                                                                                                                                                       193-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2QX2)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2QX2)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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    Leu A:287 - Pro A:288   [ RasMol ]  
 

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