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(-) Description

Title :  HIGH RESOLUTION STRUCTURE OF THE MAJOR PERIPLASMIC DOMAIN FROM THE CELL SHAPE-DETERMINING FILAMENT MREC (MONOCLINIC FORM)
 
Authors :  A. L. Lovering, N. C. J. Strynadka
Date :  26 Jun 07  (Deposition) - 07 Aug 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.23
Chains :  Asym./Biol. Unit :  A
Keywords :  Filament A-Lytic Protease Fold, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. L. Lovering, N. C. Strynadka
High-Resolution Structure Of The Major Periplasmic Domain From The Cell Shape-Determining Filament Mrec.
J. Mol. Biol. V. 372 1034 2007
PubMed-ID: 17707860  |  Reference-DOI: 10.1016/J.JMB.2007.07.022

(-) Compounds

Molecule 1 - CELL SHAPE DETERMINING PROTEIN MREC
    Atcc: BAA-255
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PET41
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector: PET
    Expression System Vector Type: PLASMID
    Fragment: MAJOR PERIPLASMIC DOMAIN
    Gene: MREC
    Organism Scientific: STREPTOCOCCUS PNEUMONIAE
    Organism Taxid: 171101
    Strain: R6

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2QF5)

(-) Sites  (0, 0)

(no "Site" information available for 2QF5)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2QF5)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2QF5)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2QF5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2QF5)

(-) Exons   (0, 0)

(no "Exon" information available for 2QF5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:158
 aligned with MREC_STRR6 | Q8DMY2 from UniProtKB/Swiss-Prot  Length:272

    Alignment length:163
                                   119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269   
           MREC_STRR6   110 ATKTLAADVIMRSPVSWKQELTLDAGRSKGASENMLAIANGGLIGSVSKVEENSTIVNLLTNTENADKISVKIQHGSTTIYGIIIGYDKENDVLKISQLNSNSDISAGDKVTTGGLGNFNVADIPVGEVVATTHSTDYLTREVTVKLSADTHNVDVIELVGNS 272
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeee.......eeee..hhhhh.....eeee..eeeeeeeee....eeeee....eeeeeeeeeeee..eeeeeeeeeee....eeeee............eeeee.......eeeeeeeeeeee..-----.eeeeee........eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qf5 A 110 ATKTLAADVIMRSPVSWKQELTLDAGRSKGASENMLAIANGGLIGSVSKVEENSTIVNLLTNTENADKISVKIQHGSTTIYGIIIGYDKENDVLKISQLNSNSDISAGDKVTTGGLGNFNVADIPVGEVVATTHS-----REVTVKLSADTHNVDVIELVGNS 272
                                   119       129       139       149       159       169       179       189       199       209       219       229       239    |    -|      259       269   
                                                                                                                                                                244   250
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2QF5)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2QF5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2QF5)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (MREC_STRR6 | Q8DMY2)
biological process
    GO:0008360    regulation of cell shape    Any process that modulates the surface configuration of a cell.
cellular component
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MREC_STRR6 | Q8DMY2: 2qf4

(-) Related Entries Specified in the PDB File

2qf4 HIGH RESOLUTION STRUCTURE OF THE MAJOR PERIPLASMIC DOMAIN FROM THE CELL SHAPE-DETERMINING FILAMENT MREC (ORTHORHOMBIC FORM)