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(-) Description

Title :  CRYSTAL STRUCTURE OF ETHANOLAMINE AMMONIA-LYASE HEAVY CHAIN (YP_013784.1) FROM LISTERIA MONOCYTOGENES 4B F2365 AT 2.15 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  26 Jun 07  (Deposition) - 10 Jul 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C,D,E,F  (1x)
Biol. Unit 2:  A,F  (1x)
Biol. Unit 3:  D,E  (1x)
Biol. Unit 4:  B,C  (1x)
Keywords :  Yp_013784. 1, Ethanolamine Ammonia-Lyase Heavy Chain, Ethanolamine Ammonia Lyase Large Subunit (Eutb), Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Ethanolamine Ammonia-Lyase Heavy Chain (Yp_013784. 1) From Listeria Monocytogenes 4B F2365 At 2. 15 Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ETHANOLAMINE AMMONIA-LYASE HEAVY CHAIN
    Chains: A, B, C, D, E, F
    EC Number: 4.3.1.7
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: YP_013784.1, EUTB, LMOF2365_1185
    Organism Scientific: LISTERIA MONOCYTOGENES SEROTYPE 4B
    Organism Taxid: 265669
    Strain: F2365

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): ABCDEF
Biological Unit 2 (1x): A    F
Biological Unit 3 (1x):    DE 
Biological Unit 4 (1x):  BC   

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 95)

Asymmetric Unit (2, 95)
No.NameCountTypeFull Name
1GOL6Ligand/IonGLYCEROL
2MSE89Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (2, 95)
No.NameCountTypeFull Name
1GOL6Ligand/IonGLYCEROL
2MSE89Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (2, 33)
No.NameCountTypeFull Name
1GOL3Ligand/IonGLYCEROL
2MSE30Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (2, 31)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2MSE29Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (2, 31)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2MSE30Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS D:139 , ALA D:385BINDING SITE FOR RESIDUE GOL D 455
2AC2SOFTWARELYS A:139 , THR A:384 , ALA A:385 , LEU F:418BINDING SITE FOR RESIDUE GOL A 455
3AC3SOFTWAREILE C:391BINDING SITE FOR RESIDUE GOL C 455
4AC4SOFTWAREGLN D:373 , VAL D:376 , SER D:380 , THR D:412BINDING SITE FOR RESIDUE GOL D 456
5AC5SOFTWARESER A:380 , GLY A:393 , GLU A:411 , THR A:412BINDING SITE FOR RESIDUE GOL A 456
6AC6SOFTWARELEU A:418 , LYS F:139 , ALA F:385BINDING SITE FOR RESIDUE GOL F 455

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2QEZ)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Leu A:7 -Phe A:8
2Gly A:280 -Pro A:281
3Gln A:290 -Gly A:291
4Gly B:280 -Pro B:281
5Gly C:280 -Pro C:281
6Ala C:371 -Asp C:372
7Pro D:163 -Asn D:164
8Gly D:280 -Pro D:281
9Gly D:397 -Asp D:398
10Gly E:280 -Pro E:281
11His E:299 -Phe E:300
12Gly F:280 -Pro F:281

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2QEZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2QEZ)

(-) Exons   (0, 0)

(no "Exon" information available for 2QEZ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:439
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -2qezA01 A:2-53                                      -2qezA02 A:55-141 lyase                                                                 2qezA03 A:142-453 Aldolase class I                                                                                                                                                                                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee....eee..hhhhhhhhh...hhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhh...hhhhhhhhhh..hhhhhhhhhhh.hhhhhhhhhhh....ee...ee.................hhhhhhhhhhhhhhh......eee.....hhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhh......eeee...hhhhhhhhh.hhhhhhhhhhhhhhhh.......eeee........hhhhhhhhhhhhhhhh.eeeeeeeee...hhhhhhhhhhhhhhhhhhh..eeeeeee.....hhhhhhhhhhhhhhh....eeeee...hhhhhhhh.hhhhhhhhhhhhh...hhhhhhhhhhhh.ee..ee.....hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qez A   1 mILKTNLFGHTYQFKSITDVLAKANEEKSGDRLAGVAAESAEERVAAKVVLSKmTLGDLRNNPVVPYETDEVTRIIQDQVNDRIHDSIKNWTVEELREWILDHKTTDADIKRVARGLTSEIIAAVTKLmSNLDLIYGAKKIRVIAHANTTIGLPGTFSARLQPNHPTDDPDGILASLmEGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDVPTQTCVLAHVKTQmEAmRRGAPTGLVFQSIAGSEKGNTAFGFDGATIEEARQLALQSGAATGPNVmYFETGQGSFGVDQVTmEARCYGFAKKFDPFLVNTVVGFYDSKQVIRAGLEDHFmGKLTGISmGCDVCYTNHmADQNDVENLSVLLTAAGCNFImGIPHGDDVmLNYQTTGYHETATLRELFGLKPIKEFDQWmEKmGFSENGKLTSRAGDASIFL 453
                            |       10        20        30        40        50   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230 |  |  240       250       260       270       280   |   290 ||    307       317       327 ||    343       353     | 363     ||374       384       394      |404       414       424      |434       444         
                            |                                                   54-MSE                                                                    129-MSE                                          178-MSE                                               232-MSE                                             284-MSE 292|      |                   329|            351-MSE 359-MSE   369-MSE               392-MSE  401-MSE                       431-MSE                  
                            1-MSE                                                                                                                                                                                                                                   235-MSE                                                   300      |                    336                               371                                                            434-MSE               
                                                                                                                                                                                                                                                                                                                                     307-MSE                                                                                                                                       


Chain B from PDB  Type:PROTEIN  Length:437
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -2qezB01 B:2-53                                      -2qezB02 B:55-141 lyase                                                                 2qezB03 B:142-453 Aldolase class I                                                                                                                                                                                                                                                                       CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee..hhhhhhhhhh..hhhhhh......hhhhhhhhhhhhhh.hhhhhhhh.......hhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhh...hhhhhhhhhh..hhhhhhhhhhh.hhhhhhhhhhh....ee...ee.................hhhhhhhhhhhhhh.......eee.....hhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhh......eeee...hhhhhhhhh.hhhhhhhhhhhhhhhh.......eeee.....hhhhhhhhhhhhhhhhh..eeeeeeee....hhhhhhhhhhhhhhhhhhh..eeeeeeee.....hhhhhhhhhhhhhhh....eeeeee..hhhhhh.hhhhhhhhhhhhh...hhhhhhhhhhhh.ee..ee........... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qez B   1 mILKTNLFGHTYQFKSITDVLAKANEEKSGDRLAGVAAESAEERVAAKVVLSKmTLGDLRNNPVVPYETDEVTRIIQDQVNDRIHDSIKNWTVEELREWILDHKTTDADIKRVARGLTSEIIAAVTKLmSNLDLIYGAKKIRVIAHANTTIGLPGTFSARLQPNHPTDDPDGILASLmEGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDVPTQTCVLAHVKTQmEAmRRGAPTGLVFQSIAGSEKGNTAFGFDGATIEEARQLALQSGAATGPNVmYFETGFGVDQVTmEARCYGFAKKFDPFLVNTVVGFILYDSKQVIRAGLEDHFmGKLTGISmGCDVCYTNHmKADQNDVENLSVLLTAAGCNFImGIPHDVmLNYQTTGYHETATLRELFGLKPIKEFDQWmEKmGFSENGKLTSRAGDASIFL 453
                            |       10        20        30        40        50   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230 |  |  240       250       260       270       280   |   300      |310       320       330|      344      |354    |  364    |  374       384       394 || |  406       416       426    |  436       446       
                            1-MSE                                               54-MSE                                                                    129-MSE                                          178-MSE                                               232-MSE                                             284-MSE9|      |                    330|             351-MSE 359-MSE   369-MSE                392-MSE| |                           431-MSE                  
                                                                                                                                                                                                                                                                    235-MSE                                                300      |                     335                                                           399 |                              434-MSE               
                                                                                                                                                                                                                                                                                                                                  307-MSE                                                                                 401-MSE                                                


Chain C from PDB  Type:PROTEIN  Length:437
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -2qezC01 C:2-53                                      -2qezC02 C:55-141 lyase                                                                 2qezC03 C:142-453 Aldolase class I                                                                                                                                                                                                                                                                       CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee....eee..hhhhhhhhhh..hhhhhhh.....hhhhhhhhhhhhhh.hhhhhhhh.......hhhhhhhhhh.hhhhhhhhh..hhhhhhhhhh....hhhhhhhhhh..hhhhhhhhhhh.hhhhhhhhhhh....ee...ee................hhhhhhhhhhhhhhh......eee.....hhhhhhhhhhhhhhhhhhhh....eee..hhhhhhhhhhh......eeee...hhhhhhhhh.hhhhhhhhhhhhhhhh.......eeeee.....hhhhhhhhhhhhhhh....eeeeee......hhhhhhhhhhhhhhhhhhh..eeeeeee......hhhhhhhhhhhhhhhh...eeeee..hhhhhh..hhhhhhhhhhhhh...hhhhhhhhhhh..ee..ee.....hhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qez C   1 mILKTNLFGHTYQFKSITDVLAKANEEKSGDRLAGVAAESAEERVAAKVVLSKmTLGDLRNNPVVPYETDEVTRIIQDQVNDRIHDSIKNWTVEELREWILDHKTTDADIKRVARGLTSEIIAAVTKLmSNLDLIYGAKKIRVIAHANTTIGLPGTFSARLQPNPTDDPDGILASLmEGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDVPTQTCVLAHVKTQmEAmRRGAPTGLVFQSIAGSEKGNTAFGFDGATIEEARQLALQSGAATGPNVmYFETGQFGVDQVTmEARCYGFAKKFDPFLVNTVVPEYLYDSKQVIRAGLEDHFmGKLTGISmGCDVCYTNHmKADQNDVENLSVLLTAAGCNFImGIPHGVmLNYQTTGYHETATLRELFGLKPIKEFDQWmEKmGFSENGKLTSRAGDASIFL 453
                            |       10        20        30        40        50   |    60        70        80        90       100       110       120       130       140       150       160   ||  171      |181       191       201       211       221       231|  |   241       251       261       271       281  |    300      |310       320      |334       344      |354    |  364    |  374       384       394  |||  406       416       426    |  436       446       
                            1-MSE                                               54-MSE                                                                    129-MSE                            164|         178-MSE                                               232-MSE                                             284-MSE90|      |                 327|                351-MSE 359-MSE   369-MSE                392-MSE7||                           431-MSE                  
                                                                                                                                                                                              166                                                                  235-MSE                                                 300      |                  332                                                               400|                              434-MSE               
                                                                                                                                                                                                                                                                                                                                  307-MSE                                                                                 401-MSE                                                


Chain D from PDB  Type:PROTEIN  Length:438
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains -2qezD01 D:2-53                                      -2qezD02 D:55-141 lyase                                                                 2qezD03 D:142-453 Aldolase class I                                                                                                                                                                                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeee..eeee..hhhhhhhhh...hhhhhhh.....hhhhhhhhhhhhhh.hhhhhhh....hhhhhhhhhhhhh..hhhhhhhhh..hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh....ee...ee.................hhhhhhhhhhhhhhh......eee.....hhhhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhh......eeee...hhhhhhhh..hhhhhhhhhhhhhhhh.......eeee.....hhhhhhhhhhhhhhh....eeeeeeee...hhhhhhhhhhhhhhhhhhh..eeeeeeee..hhhhhhhhhhhhhhhhhh....eeeeee..hhhhhhhh.hhhhhhhhhhhhh...hhhhhhhhhhh..ee..ee.....hhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2qez D   1 mILKTNLFGHTYQFKSITDVLAKANEEKSGDRLAGVAAESAEERVAAKVVLSKmTLGDLRNNPVVPYETDEVTRIIQDQVNDRIHDSIKNWTVEELREWILDHKTTDADIKRVARGLTSEIIAAVTKLmSNLDLIYGAKKIRVIAHANTTIGLPGTFSARLQPNHPTDDPDGILASLmEGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDVPTQTCVLAHVKTQmEAmRRGAPTGLVFQSIAGSEKGNTAFGFDGATIEEARQLALQSGAATGPNVmYFETGFGVDQVTmEARCYGFAKKFDPFLVNTVVGFIYDSKQVIRAGLEDHFmGKLTGISmGCDVCYTNHmKADQNDVENLSVLLTAAGCNFImGIPHGDDVmLNYQTTGYHETATLRELFGLKPIKEFDQWmEKmGFSENGKLTSRAGDASIFL 453
                            |       10        20        30        40        50   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230 |  |  240       250       260       270       280   |   300      |310       320       330|      345     | 355   |   365   |   375       385      |395     | 405       415       425     | 435       445        
                            1-MSE                                               54-MSE                                                                    129-MSE                                          178-MSE                                               232-MSE                                             284-MSE9|      |                    330|            351-MSE 359-MSE   369-MSE                392-MSE  401-MSE                       431-MSE                  
                                                                                                                                                                                                                                                                    235-MSE                                                300      |                     336                                                                                               434-MSE               
                                                                                                                                                                                                                                                                                                                                  307-MSE                                                                                                                                         


Chain E from PDB  Type:PROTEIN  Length:434
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -2qezE01 E:2-53                                      -2qezE02 E:55-141 lyase                                                                 2qezE03 E:142-454 Aldolase class I                                                                                                                                                                                                                                                                    CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee..hhhhhhhhh...hhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhh.hhhhhhhhh..hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...ee...ee.................hhhhhhhhhhhhhhh......eee.....hhhhhhhhhhhhhhhhhhhh....eee..hhhhhhhhhhh......eeee...hhhhhhhhh.hhhhhhhhhhhhhhhh.......eeee......hhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhhhhh..eeeeeee.hhhhhhhhhhhhhhh....eeeee...hhhhhhhh.hhhhhhhhhhhhh...hhhhhhhhhhh..ee..ee......hhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qez E   1 mILKTNLFGHTYQFKSITDVLAKANEEKSGDRLAGVAAESAEERVAAKVVLSKmTLGDLRNNPVVPYETDEVTRIIQDQVNDRIHDSIKNWTVEELREWILDHKTTDADIKRVARGLTSEIIAAVTKLmSNLDLIYGAKKIRVIAHANTTIGLPGTFSARLQPNHPTDDPDGILASLmEGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDVPTQTCVLAHVKTQmEAmRRGAPTGLVFQSIAGSEKGNTAFGFDGATIEEARQLALQSGAATGPNVmYFETGHFGVDQVTmEARCYGFAKKFDPFLVNTVVGFYDSKQVIRAGLEDHFmGKLTGISmGCDVCYTDQNDVENLSVLLTAAGCNFImGIPHGDDVmLNYQTTGYHETATLRELFGLKPIKEFDQWmEKmGFSENGKLTSRAGDASIFLK 454
                            |       10        20        30        40        50   |    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230 |  |  240       250       260       270       280   |   299       309       319       329|      345     | 355   |   365||     380       390 |     400|      410       420       430|  |   440       450    
                            1-MSE                                               54-MSE                                                                    129-MSE                                          178-MSE                                               232-MSE                                             284-MSE9|     307-MSE               329|            351-MSE 359-MSE366|                 392-MSE  401-MSE                       431-MSE                   
                                                                                                                                                                                                                                                                    235-MSE                                                299                            336                            372                                                           434-MSE                


Chain F from PDB  Type:PROTEIN  Length:443
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -2qezF01 F:2-53                                    -2qezF02 F:55-141 lyase                                                                 2qezF03 F:142-454 Aldolase class I                                                                                                                                                                                                                                                                               CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee....ee..hhhhhhhhhh..hhhhhhh.....hhhhhhhhhhhhhh.hhhhhhh........hhhhhhhhh..hhhhhhhhh..hhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhh....ee...ee.................hhhhhhhhhhhhhhh......eee.....hhhhhhhhhhhhhhhhhhhh....eee..hhhhhhhhhhh......eeee...hhhhhhhhh.hhhhhhhhhhhhhhhh.......eeee......hhhhhhhhhhhhhhh....eeeeeeee.......hhhhhhhhhhhhhhhhhhhh..eeeeeeee..hhhhhhhhhhhhhhhhhh....eeeeee..hhhhhhhh.hhhhhhhhhhhhh...hhhhhhhhhhh..ee..ee......hhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qez F   1 mILKTNGHTYQFKSITDVLAKANEEKSGDRLAGVAAESAEERVAAKVVLSKmTLGDLRNNPVVPYETDEVTRIIQDQVNDRIHDSIKNWTVEELREWILDHKTTDADIKRVARGLTSEIIAAVTKLmSNLDLIYGAKKIRVIAHANTTIGLPGTFSARLQPNHPTDDPDGILASLmEGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDVPTQTCVLAHVKTQmEAmRRGAPTGLVFQSIAGSEKGNTAFGFDGATIEEARQLALQSGAATGPNVmYFETGQFGVDQVTmEARCYGFAKKFDPFLVNTVVGFIGPEYLYDSKQVIRAGLEDHFmGKLTGISmGCDVCYTNHmKADQNDVENLSVLLTAAGCNFImGIPHGDDVmLNYQTTGYHETATLRELFGLKPIKEFDQWmEKmGFSENGKLTSRAGDASIFLK 454
                            |    || 12        22        32        42        52 |      62        72        82        92       102       112       122      |132       142       152       162       172     | 182       192       202       212       222       232  |    242       252       262       272       282 |     301     | 311       321       331       341       351       361       371       381       391|      401       411       421       431  |    441       451   
                            1-MSE6|                                           54-MSE                                                                    129-MSE                                          178-MSE                                               232-MSE                                             284-MSE90|      |                                         351-MSE 359-MSE   369-MSE                392-MSE  401-MSE                       431-MSE                   
                                  9                                                                                                                                                                                                                               235-MSE                                                 300      |                                                                                                                            434-MSE                
                                                                                                                                                                                                                                                                                                                                 307-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2QEZ)

(-) CATH Domains  (3, 18)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2QEZ)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 2QEZ)

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Asymmetric Unit
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  Cis Peptide Bonds
    Ala C:371 - Asp C:372   [ RasMol ]  
    Gln A:290 - Gly A:291   [ RasMol ]  
    Gly A:280 - Pro A:281   [ RasMol ]  
    Gly B:280 - Pro B:281   [ RasMol ]  
    Gly C:280 - Pro C:281   [ RasMol ]  
    Gly D:280 - Pro D:281   [ RasMol ]  
    Gly D:397 - Asp D:398   [ RasMol ]  
    Gly E:280 - Pro E:281   [ RasMol ]  
    Gly F:280 - Pro F:281   [ RasMol ]  
    His E:299 - Phe E:300   [ RasMol ]  
    Leu A:7 - Phe A:8   [ RasMol ]  
    Pro D:163 - Asn D:164   [ RasMol ]  
 
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