2QA2 - JenaLib

Title :   CRYSTAL STRUCTURE OF CABE, AN AROMATIC HYDROXYLASE FROM ANGUCYCLINE BIOSYNTHESIS, DETERMINED TO 2.7 A RESOLUTION

Authors :   H. Koskiniemi, D. Dobritzsch, M. Metsa-Ketela, P. Kallio, J. Niemi, G.

Date :   14 Jun 07 (Deposition) - 14 Aug 07 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.70

Chains :   Asym. Unit : A
Biol. Unit 1: A  (2x)

Keywords :   Fad, Angucycline, Polyketide, Aromatic Hydroxylase, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   H. Koskiniemi, M. Metsa-Ketela, D. Dobritzsch, P. Kallio, H. Korhonen, P. Mantsala, G. Schneider, J. Niemi
Crystal Structures Of Two Aromatic Hydroxylases Involved In The Early Tailoring Steps Of Angucycline Biosynthesis
J. Mol. Biol. V. 372 633 2007
PubMed-ID: 17669423 | Reference-DOI: 10.1016/J.JMB.2007.06.087

Compounds

Molecule 1 - POLYKETIDE OXYGENASE CABE
	Chains	:	A
	EC Number	:	1.14.13.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PBHB
	Expression System Strain	:	TOP10
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	CABE
	Organism Scientific	:	STREPTOMYCES
	Organism Taxid	:	1883
	Strain	:	SP. H021
	Synonym	:	CABE; AROMATIC HYDROXYLASE

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 1)

Asymmetric Unit (1, 1)

No.	Name	Count	Type	Full Name
1	FAD	1	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE

Biological Unit 1 (1, 2)

No.	Name	Count	Type	Full Name
1	FAD	2	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE

Sites (1, 1)

Asymmetric Unit (1, 1)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLY A:9 , GLY A:11 , PRO A:12 , ALA A:13 , GLU A:32 , GLN A:33 , ARG A:42 , GLY A:43 , LEU A:44 , GLN A:96 , HIS A:118 , VAL A:120 , CYS A:151 , ASP A:152 , GLY A:153 , THR A:157 , GLY A:274 , ASP A:275 , PRO A:282 , GLY A:285 , GLN A:286 , GLY A:287 , MET A:288 , ASN A:289 , HOH A:514	BINDING SITE FOR RESIDUE FAD A 500

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:489
 aligned with D0VWY3_9ACTN | D0VWY3 from UniProtKB/TrEMBL  Length:474

    Alignment length:489
                                           1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
                                     -     |   5        15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465         
         D0VWY3_9ACTN     - ---------------MLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEITPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDISHGEPVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFLSGDEMQPLRDVLSELIRYDEVSRHLAGMVSGLDIRYEVDGGDHPLLGMRMPHQELVRAHGKTSTTELLHPARGVLLDIADDAEVREAATGWSDRVDIVTASLHDAPPQGPLSDARAVLVRPDGYVAWISPGSRAGLTEALDRWFGPAR 474
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..hhhhhhhhhhhhhh...eeeee...........eeehhhhhhhhhhhhhhhhhh...ee.eeee..eeee.hhh.....eeeeeehhhhhhhhhhhhhhh..eeee..eeeeeee....eeeeee....eeeeeeeeeee.....hhhhhhh.....ee.....eeeeeee......eeeeeee..eeeeeee.....eeeeeee............hhhhhhhhhhhhhh......eeeeeeee...eee....ee..eee.hhh.eee.....hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh......................eee....eee.hhhhh...eeeee...hhhhhhhhhhhh..eeeee.ee.............eeee.....eeeee.....hhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2qa2 A   1 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEITPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDISHGEPVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFLSGDEMQPLRDVLSELIRYDEVSRHLAGMVSGLDIRYEVDGGDHPLLGMRMPHQELVRAHGKTSTTELLHPARGVLLDIADDAEVREAATGWSDRVDIVTASLHDAPPQGPLSDARAVLVRPDGYVAWISPGSRAGLTEALDRWFGPAR 489
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (4, 4)

Visualization

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Asymmetric Unit
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	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Ser A:470 - Pro A:471	[ RasMol ]

Biological Unit
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		Biological Unit 1	[ Jena3D ]

Still Images

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Description