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(-) Description

Title :  CRYSTAL STRUCTURE OF (ST0148) CONSERVED HYPOTHETICAL FROM SULFOLOBUS TOKODAII STRAIN7
 
Authors :  J. Jeyakanthan, S. P. Kanaujia, Z. A. Rafi, K. Sekar, Y. Agari, Riken St Genomics/Proteomics Initiative (Rsgi)
Date :  31 Mar 07  (Deposition) - 02 Oct 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.06
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (3x)
Biol. Unit 2:  B  (3x)
Keywords :  Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Jeyakanthan, S. P. Kanaujia, Z. A. Rafi, K. Sekar, Y. Agari, A. Ebihara, S. Kuramitsu, A. Shinkai, Y. Shiro
Crystal Structure Of (St0148) Conserved Hypothetical From Sulfolobus Tokodaii Strain7
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN ST0148
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21A
    Expression System Strain: BL-21 CONDON PLUS (DE3)-RIL
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: SULFOLOBUS TOKODAII
    Organism Taxid: 273063
    Strain: 7

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (3x): A 
Biological Unit 2 (3x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:108
 aligned with Q976P3_SULTO | Q976P3 from UniProtKB/TrEMBL  Length:108

    Alignment length:108
                                    10        20        30        40        50        60        70        80        90       100        
         Q976P3_SULTO     1 MKVVVQIKDFDKVPQALRSVINLYNDIKDAEIEVVLHQSAIKALLKDSDTRSIIEDLIKKNILIVGCENSIRSQNLSHDQLIPGIKIVTSGVGEIVRKQSEGWIYLAL 108
               SCOP domains d2pd2a_ A: automated matches                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee.hhhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhh....hhhhhhhhhhh..eeeeehhhhhhh..hhhhh....eee.hhhhhhhhhhhh..eeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 2pd2 A   1 MKVVVQIKDFDKVPQALRSVINLYNDIKDAEIEVVLHQSAIKALLKDSDTRSIIEDLIKKNILIVGCENSIRSQNLSHDQLIPGIKIVTSGVGEIVRKQSEGWIYLAL 108
                                    10        20        30        40        50        60        70        80        90       100        


Chain B from PDB  Type:PROTEIN  Length:108
 aligned with Q976P3_SULTO | Q976P3 from UniProtKB/TrEMBL  Length:108

    Alignment length:108
                                    10        20        30        40        50        60        70        80        90       100        
         Q976P3_SULTO     1 MKVVVQIKDFDKVPQALRSVINLYNDIKDAEIEVVLHQSAIKALLKDSDTRSIIEDLIKKNILIVGCENSIRSQNLSHDQLIPGIKIVTSGVGEIVRKQSEGWIYLAL 108
               SCOP domains d2pd2b_ B: automated matches                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) DrsE-2pd2B01 B:1-108                                                                                         Pfam domains (1)
           Pfam domains (2) DrsE-2pd2B02 B:1-108                                                                                         Pfam domains (2)
         Sec.struct. author .eeeeee.hhhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhh....hhhhhhhhhhh..eeeeehhhhhhh..hhhhh....eee.hhhhhhhhhhhh..eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 2pd2 B   1 MKVVVQIKDFDKVPQALRSVINLYNDIKDAEIEVVLHQSAIKALLKDSDTRSIIEDLIKKNILIVGCENSIRSQNLSHDQLIPGIKIVTSGVGEIVRKQSEGWIYLAL 108
                                    10        20        30        40        50        60        70        80        90       100
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 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2PD2)

(-) Pfam Domains  (1, 2)

Asymmetric Unit
(-)
Clan: DsrEFH-like (7)

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