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(-) Description

Title :  CRYSTAL STRUCTURE OF A PUTATIVE ACETYLTRANSFERASE BELONGING TO THE GNAT FAMILY (XCC2953) FROM XANTHOMONAS CAMPESTRIS PV. CAMPESTRIS AT 1.40 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  26 Feb 07  (Deposition) - 20 Mar 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Hypothetical Protein (Np_638301. 1) Fro Xanthomonas Campestris At 1. 40 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN XCC2953
    Atcc: 33913
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: NP_638301.1, XCC2953
    Organism Scientific: XANTHOMONAS CAMPESTRIS PV. CAMPESTRIS
    Organism Taxid: 340
    Strain: NCPPB528, LMG568

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 12)

Asymmetric Unit (4, 12)
No.NameCountTypeFull Name
1EDO5Ligand/Ion1,2-ETHANEDIOL
2MSE4Mod. Amino AcidSELENOMETHIONINE
3SO42Ligand/IonSULFATE ION
4UNL1Ligand/IonUNKNOWN LIGAND
Biological Unit 1 (4, 24)
No.NameCountTypeFull Name
1EDO10Ligand/Ion1,2-ETHANEDIOL
2MSE8Mod. Amino AcidSELENOMETHIONINE
3SO44Ligand/IonSULFATE ION
4UNL2Ligand/IonUNKNOWN LIGAND

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:81 , GLY A:82 , TYR A:85 , SER A:86 , HOH A:309 , HOH A:342 , HOH A:355 , HOH A:554BINDING SITE FOR RESIDUE SO4 A 142
2AC2SOFTWAREHOH A:316 , HOH A:338 , HOH A:348 , HOH A:524BINDING SITE FOR RESIDUE SO4 A 143
3AC3SOFTWAREGLY A:0 , MSE A:1 , TRP A:28 , ARG A:104 , TYR A:134 , HOH A:327 , HOH A:369 , HOH A:386 , HOH A:503BINDING SITE FOR RESIDUE UNL A 300
4AC4SOFTWAREGLY A:72 , ASP A:73 , VAL A:74 , ALA A:108 , TYR A:116 , HOH A:384 , HOH A:513BINDING SITE FOR RESIDUE EDO A 301
5AC5SOFTWARETHR A:21 , ASP A:25 , VAL A:76 , PRO A:78 , ARG A:81 , HOH A:334 , HOH A:409BINDING SITE FOR RESIDUE EDO A 302
6AC6SOFTWAREARG A:39 , HIS A:43 , ASP A:98BINDING SITE FOR RESIDUE EDO A 303
7AC7SOFTWAREGLN A:100 , GLY A:101 , ARG A:133 , HOH A:393 , HOH A:546 , HOH A:553BINDING SITE FOR RESIDUE EDO A 304
8AC8SOFTWAREGLY A:120 , ARG A:133BINDING SITE FOR RESIDUE EDO A 305

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2OZH)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2OZH)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2OZH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2OZH)

(-) Exons   (0, 0)

(no "Exon" information available for 2OZH)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:142
 aligned with Q8P6L4_XANCP | Q8P6L4 from UniProtKB/TrEMBL  Length:141

    Alignment length:142
                             1                                                                                                                                            
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139  
         Q8P6L4_XANCP     - -MPHVHVSTDNSLLDIGLIHRTLSQDTDWAKDIPLALVQRAIDHSLCFGGFVDGRQVAFARVISDYATFAYLGDVFVLPEHRGRGYSKALMDAVMAHPDLQGLRRFSLATSDAHGLYARYGFTPPLFPQSLMERYVPGLYST 141
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2ozhA01 A:0-132  [code=3.40.630.30, no name defined]                                                                                 --------- CATH domains
               Pfam domains -------------------------------------------------Acetyltransf_1-2ozhA01 A:49-122                                           ------------------- Pfam domains
         Sec.struct. author .....eee.hhhhhhhhhhhhhhhhhh......hhhhhhhhhhh.eeeeeee..eeeeeeeeee....eeeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eee.....hhhhhhh.......hhhhh........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ozh A   0 GmPHVHVSTDNSLLDIGLIHRTLSQDTDWAKDIPLALVQRAIDHSLCFGGFVDGRQVAFARVISDYATFAYLGDVFVLPEHRGRGYSKALmDAVmAHPDLQGLRRFSLATSDAHGLYARYGFTPPLFPQSLmERYVPGLYST 141
                             |       9        19        29        39        49        59        69        79        89|   |   99       109       119       129 |     139  
                             |                                                                                       90-MSE                                  131-MSE      
                             1-MSE                                                                                       94-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2OZH)

(-) CATH Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: Acetyltrans (109)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A   (Q8P6L4_XANCP | Q8P6L4)
molecular function
    GO:0008080    N-acetyltransferase activity    Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.

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