Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  MOTOR DOMAIN OF NEUROSPORA CRASSA KINESIN-3 (NCKIN3)
 
Authors :  A. Marx, J. Muller, E. -M. Mandelkow, G. Woehlke, E. Mandelkow
Date :  16 Feb 07  (Deposition) - 29 Jan 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.25
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,C  (1x)
Biol. Unit 2:  B,D  (1x)
Keywords :  Kinesin; Kinesin-3; Motor Domain; Adp; Neck Linker, Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Marx, J. Muller, E. -M. Mandelkow, G. Woehlke, C. Bouchet-Marquis, A. Hoenger, E. Mandelkow
X-Ray Structure And Microtubule Interaction Of The Motor Domain Of Neurospora Crassa Nckin3, A Kinesin With Unusual Processivity
Biochemistry V. 47 1848 2008
PubMed-ID: 18205396  |  Reference-DOI: 10.1021/BI701483H

(-) Compounds

Molecule 1 - RELATED TO KINESIN-LIKE PROTEIN KIF1C
    Chains: A, B, C, D
    EC Number: 3.6.4.4
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Plasmid: PT7-7
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Fragment: MOTOR DOMAIN (RESIDUES 1-434)
    Gene: 17E5.250
    Mutation: YES
    Organism Scientific: NEUROSPORA CRASSA
    Organism Taxid: 5141
    Strain: WT 74 A
    Synonym: NCKIN3-434;
RELATED TO KINESIN-LIKE PROTEIN KIF1C

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A C 
Biological Unit 2 (1x):  B D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
1ADP4Ligand/IonADENOSINE-5'-DIPHOSPHATE
2MG4Ligand/IonMAGNESIUM ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1ADP2Ligand/IonADENOSINE-5'-DIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1ADP2Ligand/IonADENOSINE-5'-DIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:151 , ADP A:1002BINDING SITE FOR RESIDUE MG A 1001
2AC2SOFTWARESER B:151 , ADP B:1002BINDING SITE FOR RESIDUE MG B 1001
3AC3SOFTWARESER C:151 , ADP C:1002BINDING SITE FOR RESIDUE MG C 1001
4AC4SOFTWARESER D:151 , ADP D:1002BINDING SITE FOR RESIDUE MG D 1001
5AC5SOFTWAREARG A:47 , ALA A:48 , LEU A:50 , SER A:106 , GLN A:145 , GLY A:147 , SER A:148 , GLY A:149 , LYS A:150 , SER A:151 , TYR A:152 , MG A:1001 , ASP C:159BINDING SITE FOR RESIDUE ADP A 1002
6AC6SOFTWAREARG B:47 , LEU B:50 , GLN B:145 , GLY B:147 , SER B:148 , GLY B:149 , LYS B:150 , SER B:151 , TYR B:152 , MG B:1001BINDING SITE FOR RESIDUE ADP B 1002
7AC7SOFTWAREASP A:159 , ARG C:47 , ALA C:48 , LEU C:50 , GLN C:145 , GLY C:147 , SER C:148 , GLY C:149 , LYS C:150 , SER C:151 , TYR C:152 , MG C:1001BINDING SITE FOR RESIDUE ADP C 1002
8AC8SOFTWAREARG D:47 , ALA D:48 , LEU D:50 , GLN D:145 , GLY D:147 , SER D:148 , GLY D:149 , LYS D:150 , SER D:151 , TYR D:152 , MG D:1001BINDING SITE FOR RESIDUE ADP D 1002

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2OWM)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2OWM)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2OWM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2OWM)

(-) Exons   (0, 0)

(no "Exon" information available for 2OWM)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:328
 aligned with Q9C2M3_NEUCS | Q9C2M3 from UniProtKB/TrEMBL  Length:676

    Alignment length:389
                                    72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442         
         Q9C2M3_NEUCS    63 KDPGANVRVVVRVRAFLPRELERNAKCIVEMDPATERTSLLVPQETDFANARGARSRRVLEEKSFTFDKSFWSHNTEDEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDRSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPTDYDETLSTLRYADQAKRIRTRAVVNQV 451
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2owmA00 A:34-422 Kinesin                                                                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee.eeeeeee..hhhhhhh.....eee.....eeee....---------------...eeee..eeeee.........hhhhhhhhhhhhhhhhhhh...eeeeee.....hhhhhhh......hhhhhhhhhhhhhhhhh.......eeeeeeeeeeee..eeee..............eeeee...eeeee....ee..hhhhhhhhhhhhhh................eeeeeeeeeee.-------..eeeeeeeeee......--------------...hhhhhhhhhhhhhhh.-------------------------..hhhhhhhhhhh........eeeeeeee...hhhhhhhhhhhhhhhh..ee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2owm A  34 KDPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQ---------------LEEKSFTFDKSFWSHNTEDEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIH-------TTERSSRIRLVDLAGSER--------------SNINKSLTTLGRVIAALAD-------------------------VVPYRDSVLTWLLKDSLGGNSKTAMIACISPTDYDETLSTLRYADQAKRIRTRAVVNQV 422
                                    43        53        63        73   |     -        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273      |  -    |  293       303 |       -      |323       333    |    -         -         -|      373       383       393       403       413         
                                                                      77              93                                                                                                                                                                                        280     288              305            320               338                       364                                                          


Chain B from PDB  Type:PROTEIN  Length:327
 aligned with Q9C2M3_NEUCS | Q9C2M3 from UniProtKB/TrEMBL  Length:676

    Alignment length:386
                                    76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446      
         Q9C2M3_NEUCS    67 ANVRVVVRVRAFLPRELERNAKCIVEMDPATERTSLLVPQETDFANARGARSRRVLEEKSFTFDKSFWSHNTEDEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDRSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPTDYDETLSTLRYADQAKRIRTRAVVNQVD 452
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2owmB00 B:38-423 Kinesin                                                                                                                                                                                                                                                                                                                                                                           CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee..hhhhhh......eee.....eeee....---------------...eeee..eeeee.........hhhhhhhhhhhhhhhhhhhh..eeeeee.....hhhhhhh......hhhhhhhhhhhhhhhhhhhhh..ee..eeeeeeeee..eeee..............eeeee...eeeee....ee..hhhhhhhhhhhhhhh...............eeeeeeeeeeee.------.eeeeeeeeeee.......-------------...hhhhhhhhhhhhhhh.-------------------------..hhhhhhhhhhh........eeeeeeee...hhhhhhhhhhhhhhhh.........ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2owm B  38 ANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQ---------------LEEKSFTFDKSFWSHNTEDEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHH------TTERSSRIRLVDLAGSERA-------------SNINKSLTTLGRVIAALAD-------------------------VVPYRDSVLTWLLKDSLGGNSKTAMIACISPTDYDETLSTLRYADQAKRIRTRAVVNQVD 423
                                    47        57        67        77         -     |  97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277   |     -|      297        |-         -  |    327       337|        -         -      |367       377       387       397       407       417      
                                                                  77              93                                                                                                                                                                                         281    288               306           320               338                       364                                                           


Chain C from PDB  Type:PROTEIN  Length:328
 aligned with Q9C2M3_NEUCS | Q9C2M3 from UniProtKB/TrEMBL  Length:676

    Alignment length:389
                                    72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442         
         Q9C2M3_NEUCS    63 KDPGANVRVVVRVRAFLPRELERNAKCIVEMDPATERTSLLVPQETDFANARGARSRRVLEEKSFTFDKSFWSHNTEDEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDRSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPTDYDETLSTLRYADQAKRIRTRAVVNQV 451
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2owmC00 C:34-422 Kinesin                                                                                                                                                                                                                                                                                                                                                                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee.eeeeeee..hhhhhh......eee.....eeee....---------------...eeee..eeeee.........hhhhhhhhhhhhhhhhhhh...eeeeeee....hhhhhhh......hhhhhhhhhhhhhhhhh.......eeeeeeeeeeee..eeee..............eeeee...eeeee....ee..hhhhhhhhhhhhhh................eeeeeeeeeee.-------..eeeeeeeeee......--------------...hhhhhhhhhhhhhhh.-------------------------..hhhhhhhhhhh........eeeeeeee...hhhhhhhhhhhhhhhh..ee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2owm C  34 KDPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQ---------------LEEKSFTFDKSFWSHNTEDEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIH-------TTERSSRIRLVDLAGSER--------------SNINKSLTTLGRVIAALAD-------------------------VVPYRDSVLTWLLKDSLGGNSKTAMIACISPTDYDETLSTLRYADQAKRIRTRAVVNQV 422
                                    43        53        63        73   |     -        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273      |  -    |  293       303 |       -      |323       333    |    -         -         -|      373       383       393       403       413         
                                                                      77              93                                                                                                                                                                                        280     288              305            320               338                       364                                                          


Chain D from PDB  Type:PROTEIN  Length:325
 aligned with Q9C2M3_NEUCS | Q9C2M3 from UniProtKB/TrEMBL  Length:676

    Alignment length:386
                                    76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446      
         Q9C2M3_NEUCS    67 ANVRVVVRVRAFLPRELERNAKCIVEMDPATERTSLLVPQETDFANARGARSRRVLEEKSFTFDKSFWSHNTEDEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDRSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPTDYDETLSTLRYADQAKRIRTRAVVNQVD 452
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2owmD00 D:38-423 Kinesin                                                                                                                                                                                                                                                                                                                                                                           CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee..hhhhhh......eee.....eeee....---------------...eeee..eeeee.........hhhhhhhhhhhhhhhhhhhh..eeeeeee....hhhhhhh......hhhhhhhhhhhhhhhhhhhhh..ee..eeeeeeeee..eeee..............eeee.....eeee....ee..hhhhhhhhhhhhhhh...............eeeeeeeeeeee.------.eeeeeeeeeee.....---------------...hhhhhhhhhhhhhhh.-------------------------..hhhhhhhhhhh........eeeeeeee...hhhhhhhhhhhhhhhh.........ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2owm D  38 ANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQ---------------LEEKSFTFDKSFWSHNTEDEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHH------TTERSSRIRLVDLAGSE---------------SNINKSLTTLGRVIAALAD-------------------------VVPYRDSVLTWLLKDSLGGNSKTAMIACISPTDYDETLSTLRYADQAKRIRTRAVVNQVD 423
                                    47        57        67        77         -     |  97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277   |     -|      297      |  -         -  |    327       337|        -         -      |367       377       387       397       407       417      
                                                                  77              93                                                                                                                                                                                         281    288             304             320               338                       364
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2OWM)

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2OWM)

(-) Gene Ontology  (7, 7)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q9C2M3_NEUCS | Q9C2M3)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0008017    microtubule binding    Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
    GO:0003777    microtubule motor activity    Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0007018    microtubule-based movement    A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
    GO:0072383    plus-end-directed vesicle transport along microtubule    The directed movement of a vesicle towards the plus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.
cellular component
    GO:0005874    microtubule    Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    ADP  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2owm)
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2owm
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q9C2M3_NEUCS | Q9C2M3
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  3.6.4.4
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  Q9C2M3_NEUCS | Q9C2M3
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 2OWM)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2OWM)