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(-) Description

Title :  SOLUTION STRUCTURE OF CONSERVED HYPOTHETICAL PROTEIN HP0892 FROM HELICOBACTER PYLORI
 
Authors :  K. D. Han, S. J. Park, S. B. Jang, B. J. Lee
Date :  09 Feb 07  (Deposition) - 18 Dec 07  (Release) - 13 Jul 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Anti-Parallel Beta Sheet, Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. D. Han, S. J. Park, S. B. Jang, B. J. Lee
Solution Structure Of Conserved Hypothetical Protein Hp0892 From Helicobacter Pylori.
Proteins V. 70 599 2007
PubMed-ID: 17957768  |  Reference-DOI: 10.1002/PROT.21701

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN HP0892
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET21A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: HELICOBACTER PYLORI
    Organism Taxid: 85962
    Strain: 26695

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:90
 aligned with O25552_HELPY | O25552 from UniProtKB/TrEMBL  Length:90

    Alignment length:90
                                    10        20        30        40        50        60        70        80        90
          O25552_HELPY    1 MLTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQPLAPKYKDHPLKGGLKDFRECHLKPDLLLVYQIKKQENTLFLVRLGSHSELF 90
               SCOP domains d2otra_ A: automated matches                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ---Plasmid_stabil-2otrA01 A:4-90                                                           Pfam domains
         Sec.struct. author ..eee.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.........ee........eeeeee..eeeeeeee....eeeeeeeehhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                  2otr A  1 MLTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQPLAPKYKDHPLKGGLKDFRECHLKPDLLLVYQIKKQENTLFLVRLGSHSELF 90
                                    10        20        30        40        50        60        70        80        90
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: Plasmid_toxin (9)

(-) Gene Ontology  (1, 1)

NMR Structure(hide GO term definitions)
Chain A   (O25552_HELPY | O25552)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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 Related Entries

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        O25552_HELPY | O25552: 4nrn

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