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(-) Description

Title :  CRYSTAL STRUCTURE OF THE SENSOR HISTIDINE KINASE REGULATOR YYCI FROM BACILLUS SUBTITLIS
 
Authors :  E. Santelli, R. C. Liddington
Date :  01 Dec 06  (Deposition) - 10 Apr 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.89
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,C  (1x)
Biol. Unit 2:  B,D  (1x)
Biol. Unit 3:  E,G  (1x)
Biol. Unit 4:  F,H  (1x)
Biol. Unit 5:  I,K  (1x)
Biol. Unit 6:  J,L  (1x)
Keywords :  Two-Component System, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. Santelli, R. C. Liddington, M. A. Mohan, J. A. Hoch, H. Szurmant
The Crystal Structure Of Bacillus Subtilis Yyci Reveals A Common Fold For Two Members Of An Unusual Class Of Sensor Histidine Kinase Regulatory Proteins.
J. Bacteriol. V. 189 3290 2007
PubMed-ID: 17307848  |  Reference-DOI: 10.1128/JB.01937-06

(-) Compounds

Molecule 1 - YYCI PROTEIN
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET28A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: PERIPLASMIC DOMAIN
    Gene: YYCI
    Organism Scientific: BACILLUS SUBTILIS
    Organism Taxid: 1423

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): A C         
Biological Unit 2 (1x):  B D        
Biological Unit 3 (1x):     E G     
Biological Unit 4 (1x):      F H    
Biological Unit 5 (1x):         I K 
Biological Unit 6 (1x):          J L

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 78)

Asymmetric Unit (2, 78)
No.NameCountTypeFull Name
1CL6Ligand/IonCHLORIDE ION
2MSE72Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 12)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE12Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 12)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE12Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (1, 12)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE12Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (1, 12)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE12Mod. Amino AcidSELENOMETHIONINE
Biological Unit 5 (1, 12)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE12Mod. Amino AcidSELENOMETHIONINE
Biological Unit 6 (1, 12)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE12Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:66 , ARG C:66BINDING SITE FOR RESIDUE CL A 1
2AC2SOFTWAREARG B:66 , ARG D:66 , GLN D:232BINDING SITE FOR RESIDUE CL D 2
3AC3SOFTWAREARG E:66 , SER E:273 , GLN G:232BINDING SITE FOR RESIDUE CL E 5
4AC4SOFTWAREARG F:66 , GLN H:232BINDING SITE FOR RESIDUE CL F 6
5AC5SOFTWAREARG I:66 , ARG K:66 , GLN K:232BINDING SITE FOR RESIDUE CL K 9
6AC6SOFTWAREARG J:66 , SER J:273 , ARG L:66 , GLN L:232BINDING SITE FOR RESIDUE CL L 10

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2O3O)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2O3O)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2O3O)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2O3O)

(-) Exons   (0, 0)

(no "Exon" information available for 2O3O)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:241
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:245
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273     
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILDT 278
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh...........eeeeeeeeee...hhhhhh....eee............eeeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..eee.....hhhhh..eeeeee....eeeeeeee.eeeeeeeeeeee.hhhhhhhhhhhh.......eeeeeeeeeeeeeee..eeeeeeeeeeeeeee.----...eeeeeeeee.....eee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o A  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEK----EKKTVQEYFTVNALESTILDT 278
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243       253    |  263       273     
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                          253  258                    
                                                                                    91-MSE                                                                                                                                                                                       


Chain B from PDB  Type:PROTEIN  Length:239
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:244
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273    
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILD 277
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh............eeeeeeeee...hhhhhhhh..eee.............eeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..ee.............eeeeee....eeeeeee..eeeeeeeeeee..hhhhhhhhhhhh.......eeeeeeeeeeeeeee..eeeeeeeeeeeeee....-----.eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o B  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKV-----TVQEYFTVNALESTILD 277
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243       253 |     263       273    
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                            255   261                
                                                                                    91-MSE                                                                                                                                                                                      


Chain C from PDB  Type:PROTEIN  Length:239
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:245
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273     
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILDT 278
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh..............eeeeeeeee...hhhhhhh...eee.............eeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..ee.............eeeeeee...eeeeeee..eeeeeeeeeee..hhhhhhhhhhhh.......eeeeeeeeeeeeeee..eeeeeeeeeeeeee..------..eeeeeeee.....ee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o C  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEK------KTVQEYFTVNALESTILDT 278
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243       253      |263       273     
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                          253    260                  
                                                                                    91-MSE                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:241
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:247
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILDTDQ 280
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh............eeeeeeeee...hhhhhhh...eee.............eeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..ee......hhhhh..eeeeeee...eeeeeee..eeeeeeeeeee..hhhhhhhhhhhh.......eeeeeeeeeeeeeee..eeeeeeeeeeeeee..------..eeeeeeee.....ee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o D  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEK------KTVQEYFTVNALESTILDTDQ 280
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243       253      |263       273       
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                          253    260                    
                                                                                    91-MSE                                                                                                                                                                                         


Chain E from PDB  Type:PROTEIN  Length:237
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:243
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273   
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTIL 276
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh..ee........eeeeeeeee...hhhhhhh...eee.............eeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..eeee....hhhhh..eeeeeee...eeeeeee..eeeeeeeeeee..hhhhhhhhhhhh.......eeeeeeeeeeeee.....eeeeeeeeeeeee..------..eeeeeeee.....ee Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o E  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEK------KTVQEYFTVNALESTIL 276
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243       253      |263       273   
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                          253    260                
                                                                                    91-MSE                                                                                                                                                                                     


Chain F from PDB  Type:PROTEIN  Length:240
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:244
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273    
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILD 277
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh...........eeeeeeeeee...hhhhhh....eee.............eeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..ee.............eeeeee....eeeeeee..eeeeeeeeeeee.hhhhhhhhhhhh.......eeeeeeeeeeeeeee..eeeeeeeeeeeeeeee.----.eeeeeeeeee.....ee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o F  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKK----KKTVQEYFTVNALESTILD 277
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243       253|    | 263       273    
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                           254  259                  
                                                                                    91-MSE                                                                                                                                                                                      


Chain G from PDB  Type:PROTEIN  Length:237
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:245
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273     
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILDT 278
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh..ee........eeeeeeeee...hhhhhhh...eee.............eeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..eeee...........eeeeeee...eeeeeee..eeeeeeeeeee..hhhhhhhhhhhh.......eeeeeeeeeeeeee....eeeeeeeeeeeee.--------.eeeeeeee.....ee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o G  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYE--------TVQEYFTVNALESTILDT 278
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243        |-       263       273     
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                         252      261                 
                                                                                    91-MSE                                                                                                                                                                                       


Chain H from PDB  Type:PROTEIN  Length:241
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:247
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILDTDQ 280
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh............eeeeeeeee...hhhhhhh...eee.............eeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..ee......hhhhh..eeeeeee...eeeeeee..eeeeeeeeeee..hhhhhhhhhhhh.......eeeeeeeeeeeeeee..eeeeeeeeeeeeee..------..eeeeeeee.....ee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o H  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEK------KTVQEYFTVNALESTILDTDQ 280
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243       253      |263       273       
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                          253    260                    
                                                                                    91-MSE                                                                                                                                                                                         


Chain I from PDB  Type:PROTEIN  Length:244
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:244
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273    
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILD 277
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh............eeeeeeeee...hhhhhhhh..eee.............eeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..ee......hhhhh..eeeeee....eeeeeee..eeeeeeeeeee..hhhhhhhhhhhh.......eeeeeeeeeeeeeee..eeeeeeeeeeeeeeee......eeeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o I  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILD 277
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243       253       263       273    
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                                                     
                                                                                    91-MSE                                                                                                                                                                                      


Chain J from PDB  Type:PROTEIN  Length:238
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:243
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273   
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTIL 276
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh............eeeeeeeee...hhhhhh....eee.............eeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..eee.....hhhhh..eeeeeee...eeeeeee..eeeeeeeeeee..hhhhhhhhhhhh.......eeeeeeeeeeeeeee..eeeeeeeeeeeeeee.-----..eeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o J  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEK-----KKTVQEYFTVNALESTIL 276
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243       253     | 263       273   
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                          253   259                 
                                                                                    91-MSE                                                                                                                                                                                     


Chain K from PDB  Type:PROTEIN  Length:235
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:244
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273    
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILD 277
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.eee.......eeeeeeeeee...hhhhhhh...eee.............eeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..eeee...........eeeeeee...eeeeeee..eeeeeeeeeeee.hhhhhhhhhhhh......eeeeeeeeeeeeeeee..eeeeeeeeeeeee.---------..eeeeeee.....eee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o K  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEY---------TVQEYFTVNALESTILD 277
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243       | -       263       273    
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                        251       261                
                                                                                    91-MSE                                                                                                                                                                                      


Chain L from PDB  Type:PROTEIN  Length:239
 aligned with YYCI_BACSU | Q45612 from UniProtKB/Swiss-Prot  Length:280

    Alignment length:247
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       
           YYCI_BACSU    34 KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKKVNGEKKTVQEYFTVNALESTILDTDQ 280
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) YycI-2o3oL01 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (1)
           Pfam domains (2) YycI-2o3oL02 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (2)
           Pfam domains (3) YycI-2o3oL03 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (3)
           Pfam domains (4) YycI-2o3oL04 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (4)
           Pfam domains (5) YycI-2o3oL05 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (5)
           Pfam domains (6) YycI-2o3oL06 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (6)
           Pfam domains (7) YycI-2o3oL07 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (7)
           Pfam domains (8) YycI-2o3oL08 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (8)
           Pfam domains (9) YycI-2o3oL09 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (9)
          Pfam domains (10) YycI-2o3oL10 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (10)
          Pfam domains (11) YycI-2o3oL11 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (11)
          Pfam domains (12) YycI-2o3oL12 L:34-271                                                                                                                                                                                                                         --------- Pfam domains (12)
         Sec.struct. author .hhhhhhhhhhhhhhhh............eeeeeeeee...hhhhhhh...eee.............eeeeeeeeee....hhhhhhhhhhhhhh.hhh.eeeeeee....eeeeeeee..ee.............eeeeeee...eeeeeee..eeeeeeeeeee..hhhhhhhhhhhh.......eeeeeeeeeeeeeee..eeeeeeeeeeeeee.--------.eeeeeeee.....ee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o3o L  34 KEYEVIKNDVEHDmKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLmDmPSDDHKVTSLKmKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNmIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESLITEmDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYE--------TVQEYFTVNALESTILDTDQ 280
                                    43   |    53        63        73        83     | |93       103       113       123       133       143       153       163   |   173       183       193       203|      213       223       233       243        |-       263       273       
                                        47-MSE                                    89-MSE       103-MSE                                                         167-MSE                              204-MSE                                         252      261                   
                                                                                    91-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2O3O)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2O3O)

(-) Pfam Domains  (1, 12)

Asymmetric Unit
(-)
Clan: YycI_YycH (1)
(-)
Family: YycI (1)
(-)
Bacillus subtilis (1)
1aYycI-2o3oL01L:34-271
1bYycI-2o3oL02L:34-271
1cYycI-2o3oL03L:34-271
1dYycI-2o3oL04L:34-271
1eYycI-2o3oL05L:34-271
1fYycI-2o3oL06L:34-271
1gYycI-2o3oL07L:34-271
1hYycI-2o3oL08L:34-271
1iYycI-2o3oL09L:34-271
1jYycI-2o3oL10L:34-271
1kYycI-2o3oL11L:34-271
1lYycI-2o3oL12L:34-271

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L   (YYCI_BACSU | Q45612)
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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