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(-) Description

Title :  THE STRUCTURE OF A PLANT PHOTOSYSTEM I SUPERCOMPLEX AT 3.4 ANGSTROM RESOLUTION
 
Authors :  A. Amunts, O. Drory, N. Nelson
Date :  27 Nov 06  (Deposition) - 08 May 07  (Release) - 25 Jul 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.40
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,N,1,2,3,4
Keywords :  Membranal Super Complex, Photosynthesis (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. Amunts, O. Drory, N. Nelson
The Structure Of A Plant Photosystem I Supercomplex At 3. 4 Resolution.
Nature V. 447 58 2007
PubMed-ID: 17476261  |  Reference-DOI: 10.1038/NATURE05687

(-) Compounds

Molecule 1 - PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1
    ChainsA
    Organism CommonPEA
    Organism ScientificPISUM SATIVUM
    Organism Taxid3888
    StrainALASKA
    SynonymPSAA, PSI-A
 
Molecule 2 - PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2
    ChainsB
    Organism CommonPEA
    Organism ScientificPISUM SATIVUM
    Organism Taxid3888
    SynonymPSAB, PSI-B
 
Molecule 3 - PHOTOSYSTEM I IRON-SULFUR CENTER
    ChainsC
    Organism CommonPEA
    Organism ScientificPISUM SATIVUM
    Organism Taxid3888
    SynonymPHOTOSYSTEM I SUBUNIT VII, 9 KDA POLYPEPTIDE, PSI-C, PSAC
 
Molecule 4 - PHOTOSYSTEM I REACTION CENTER SUBUNIT II, CHLOROPLAST
    ChainsD
    Organism CommonSPINACH
    Organism ScientificSPINACIA OLERACEA
    Organism Taxid3562
    SynonymPHOTOSYSTEM I 20 KDA SUBUNIT, PSI-D
 
Molecule 5 - PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLAST
    ChainsE
    Organism CommonTHALE CRESS
    Organism ScientificARABIDOPSIS THALIANA
    Organism Taxid3702
    SynonymPSI-E A
 
Molecule 6 - PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLAST
    ChainsF
    Organism CommonSPINACH
    Organism ScientificSPINACIA OLERACEA
    Organism Taxid3562
    SynonymLIGHT-HARVESTING COMPLEX I 17 KDA PROTEIN, PSI-F
 
Molecule 7 - PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLAST
    ChainsG
    Organism CommonSPINACH
    Organism ScientificSPINACIA OLERACEA
    Organism Taxid3562
    SynonymPSI-G, PHOTOSYSTEM I 9 KDA PROTEIN
 
Molecule 8 - PHOTOSYSTEM I REACTION CENTER SUBUNIT VI, CHLOROPLAST
    ChainsH
    Organism CommonSPINACH
    Organism ScientificSPINACIA OLERACEA
    Organism Taxid3562
    SynonymPSI- H, LIGHT-HARVESTING COMPLEX I 11 KDA PROTEIN
 
Molecule 9 - PHOTOSYSTEM I REACTION CENTER SUBUNIT VIII
    ChainsI
    Organism CommonPEA
    Organism ScientificPISUM SATIVUM
    Organism Taxid3888
    SynonymPSI-I
 
Molecule 10 - PHOTOSYSTEM I REACTION CENTER SUBUNIT IX
    ChainsJ
    Organism CommonSPINACH
    Organism ScientificSPINACIA OLERACEA
    Organism Taxid3562
    SynonymPSI-J
 
Molecule 11 - PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLAST
    ChainsK
    Organism CommonTHALE CRESS
    Organism ScientificARABIDOPSIS THALIANA
    Organism Taxid3702
 
Molecule 12 - PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLAST
    ChainsL
    Organism CommonSPINACH
    Organism ScientificSPINACIA OLERACEA
    Organism Taxid3562
    SynonymPSI- L, PSI SUBUNIT V
 
Molecule 13 - PHOTOSYSTEM I-N SUBUNIT
    ChainsN
    Organism ScientificPHASEOLUS VULGARIS
    Organism Taxid3885
 
Molecule 14 - AT3G54890
    Chains1
    Organism CommonTHALE CRESS
    Organism ScientificARABIDOPSIS THALIANA
    Organism Taxid3702
    SynonymCHLOROPHYLL A/B-BINDING PROTEIN, AT3G54890/F28P10_130
 
Molecule 15 - TYPE II CHLOROPHYLL A/B BINDING PROTEIN FROM PHOTOSYSTEM I
    Chains2
    Organism CommonPEA
    Organism ScientificPISUM SATIVUM
    Organism Taxid3888
 
Molecule 16 - PSI TYPE III CHLOROPHYLL A/B-BINDING PROTEIN
    Chains3
    Organism CommonTHALE CRESS
    Organism ScientificARABIDOPSIS THALIANA
    Organism Taxid3702
 
Molecule 17 - PSI LIGHT-HARVESTING ANTENNA CHLOROPHYLL A/B-BINDING PROTEIN
    Chains4
    Organism CommonPEA
    Organism ScientificPISUM SATIVUM
    Organism Taxid3888

 Structural Features

(-) Chains, Units

  1234567891011121314151617
Asymmetric/Biological Unit ABCDEFGHIJKLN1234

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 215)

Asymmetric/Biological Unit (5, 215)
No.NameCountTypeFull Name
1BCR5Ligand/IonBETA-CAROTENE
2CLA168Ligand/IonCHLOROPHYLL A
3PQN2Ligand/IonPHYLLOQUINONE
4SF43Ligand/IonIRON/SULFUR CLUSTER
5UNK37Mod. Amino Acid

(-) Sites  (162, 162)

Asymmetric Unit (162, 162)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREILE A:54 , HIS A:58 , PRO J:12BINDING SITE FOR RESIDUE CLA A 1101
002AC2SOFTWAREHIS A:62BINDING SITE FOR RESIDUE CLA A 1102
003AC3SOFTWAREHIS A:62 , PHE A:64 , VAL A:78 , ALA A:81 , HIS A:82 , GLN A:85 , LEU A:86 , TRP A:354 , HIS A:355 , LEU A:358 , ASN A:361 , LEU A:362 , LEU A:365 , CLA A:1104 , CLA A:1111 , CLA A:1123 , CLA A:1128BINDING SITE FOR RESIDUE CLA A 1103
004AC4SOFTWAREGLN A:85 , ILE A:89 , CLA A:1103 , CLA A:1128BINDING SITE FOR RESIDUE CLA A 1104
005AC5SOFTWARESER A:94 , PHE A:98 , HIS A:99 , CLA A:1106 , CLA A:1107BINDING SITE FOR RESIDUE CLA A 1105
006AC6SOFTWAREALA A:120 , ILE A:145 , THR A:146 , TYR A:675 , CLA A:1105 , CLA A:1107 , CLA A:1126BINDING SITE FOR RESIDUE CLA A 1106
007AC7SOFTWAREGLN A:121 , TRP A:124 , GLN A:129 , LEU A:132 , CLA A:1105 , CLA A:1106 , PHE B:446 , ILE J:27BINDING SITE FOR RESIDUE CLA A 1107
008AC8SOFTWAREASN A:204 , HIS A:205 , LEU A:311 , ILE A:312 , GLY A:314 , HIS A:315 , TYR A:317 , THR A:319 , ILE A:323 , CLA A:1110BINDING SITE FOR RESIDUE CLA A 1108
009AC9SOFTWAREGLN A:33 , LYS A:77 , SER A:80 , ALA A:81 , TYR A:186 , HIS A:187BINDING SITE FOR RESIDUE CLA A 1109
010BC1SOFTWARECLA A:1108 , CLA A:1146BINDING SITE FOR RESIDUE CLA A 1110
011BC2SOFTWAREMET A:202 , LEU A:210 , CLA A:1103 , CLA A:1123BINDING SITE FOR RESIDUE CLA A 1111
012BC3SOFTWARELEU A:216 , ALA A:219 , GLY A:220 , HIS A:224 , ILE A:249 , LEU A:250 , ARG A:252 , ALA A:263 , TYR A:277BINDING SITE FOR RESIDUE CLA A 1113
013BC4SOFTWARETRP A:274 , ALA A:278 , LEU A:281 , ALA A:305 , CLA K:1141BINDING SITE FOR RESIDUE CLA A 1115
014BC5SOFTWAREPHE A:283 , ASP A:298 , HIS A:302 , HIS A:375 , CLA A:1117BINDING SITE FOR RESIDUE CLA A 1116
015BC6SOFTWAREHIS A:302 , CLA A:1116BINDING SITE FOR RESIDUE CLA A 1117
016BC7SOFTWARETRP A:195BINDING SITE FOR RESIDUE CLA A 1118
017BC8SOFTWARELEU A:203 , MET A:316 , TYR A:317 , CLA A:1122 , CLA A:1123BINDING SITE FOR RESIDUE CLA A 1119
018BC9SOFTWAREHIS A:325BINDING SITE FOR RESIDUE CLA A 1120
019CC1SOFTWARELEU A:331 , HIS A:334 , HIS A:343 , LEU A:346 , LEU A:431 , CLA A:1119 , CLA A:1123 , CLA A:1129BINDING SITE FOR RESIDUE CLA A 1122
020CC2SOFTWAREVAL A:199 , MET A:202 , LEU A:203 , HIS A:206 , ILE A:360 , ASN A:361 , MET A:364 , LEU A:365 , CLA A:1103 , CLA A:1111 , CLA A:1119 , CLA A:1122BINDING SITE FOR RESIDUE CLA A 1123
021CC3SOFTWAREILE A:370 , ILE A:407 , CLA A:1135 , CLA A:1137BINDING SITE FOR RESIDUE CLA A 1124
022CC4SOFTWARETRP A:92 , THR A:146 , SER A:147 , SER A:394 , THR A:397 , HIS A:398 , TRP A:401 , ILE A:402 , ILE A:743 , TRP A:747 , PHE A:750 , CLA A:1106 , BCR A:6011BINDING SITE FOR RESIDUE CLA A 1126
023CC5SOFTWARETHR A:369 , VAL A:372 , MET A:376 , HIS A:398 , HIS A:399 , ILE A:402BINDING SITE FOR RESIDUE CLA A 1127
024CC6SOFTWAREHIS A:58 , ALA A:59 , ASP A:60 , HIS A:62 , ASP A:63 , LEU A:358 , GLY A:409 , ARG A:420 , PHE A:577 , TRP A:595 , CLA A:1103 , CLA A:1104 , CLA A:1140BINDING SITE FOR RESIDUE CLA A 1128
025CC7SOFTWAREPHE A:338 , LEU A:431 , ARG A:434 , HIS A:438 , ILE A:442 , HIS A:445 , CLA A:1122 , CLA A:1137 , THR L:25 , PRO L:26 , CLA L:1130BINDING SITE FOR RESIDUE CLA A 1129
026CC8SOFTWAREHIS A:445 , TRP A:448 , CLA A:1129 , CLA A:1137 , PRO B:686 , LEU L:23 , THR L:25 , VAL L:27 , LEU L:37 , CLA L:1504BINDING SITE FOR RESIDUE CLA L 1130
027CC9SOFTWARETRP A:448 , ILE A:451 , PHE A:452 , PHE A:455 , HIS A:456 , CLA A:1132 , CLA A:1136 , CLA B:1237 , PRO L:67 , BCR L:6020BINDING SITE FOR RESIDUE CLA A 1131
028DC1SOFTWAREHIS A:456 , GLY A:459 , LEU A:460 , ILE A:462 , HIS A:463 , MET A:467 , CLA A:1131 , CLA B:1207 , ALA L:71 , GLY L:72BINDING SITE FOR RESIDUE CLA A 1132
029DC2SOFTWAREHIS A:496 , CLA A:1134BINDING SITE FOR RESIDUE CLA A 1133
030DC3SOFTWAREALA A:504 , PRO A:505 , CLA A:1133BINDING SITE FOR RESIDUE CLA A 1134
031DC4SOFTWAREILE A:370 , GLN A:374 , TYR A:377 , PHE A:396 , TRP A:491 , GLN A:493 , HIS A:496 , ILE A:532 , HIS A:542 , PHE A:616 , CLA A:1124 , CLA A:1136 , CLA A:1137BINDING SITE FOR RESIDUE CLA A 1135
032DC5SOFTWAREPHE A:452 , LEU A:453 , PHE A:488 , ASP A:538 , HIS A:543 , ALA A:546 , CLA A:1131 , CLA A:1135 , CLA A:1137 , CLA L:1504BINDING SITE FOR RESIDUE CLA A 1136
033DC6SOFTWARELEU A:446 , ILE A:549 , HIS A:550 , CLA A:1124 , CLA A:1129 , CLA A:1135 , CLA A:1136 , CLA L:1130BINDING SITE FOR RESIDUE CLA A 1137
034DC7SOFTWAREILE A:707 , ALA A:710 , PQN A:5001 , SER B:420 , SER B:423 , TRP B:424 , LEU B:427 , CLA B:1228 , CLA B:1229 , CLA F:1139 , CLA F:1240BINDING SITE FOR RESIDUE CLA B 1138
035DC8SOFTWARETHR A:51 , TRP A:55 , ILE A:704 , HIS A:711 , PRO A:722 , PQN A:5001 , CLA B:1138 , TYR F:104 , LEU F:105 , GLU F:118 , ILE F:119BINDING SITE FOR RESIDUE CLA F 1139
036DC9SOFTWARETRP A:55 , PHE A:684 , VAL A:685 , PHE A:688 , PHE A:692 , LEU A:725 , ALA A:732 , VAL A:733 , THR A:736 , HIS A:737 , CLA A:1128 , PQN A:5001BINDING SITE FOR RESIDUE CLA A 1140
037EC1SOFTWARECLA A:1115 , UNK K:13 , UNK K:14 , UNK K:17 , UNK K:18BINDING SITE FOR RESIDUE CLA K 1141
038EC2SOFTWAREPHE A:269 , PHE A:270BINDING SITE FOR RESIDUE CLA A 1143
039EC3SOFTWARELEU A:210 , LEU A:213 , CLA A:1110BINDING SITE FOR RESIDUE CLA A 1146
040EC4SOFTWARECYS A:166 , HIS A:246BINDING SITE FOR RESIDUE CLA A 1147
041EC5SOFTWARESER A:217 , TRP A:218 , HIS A:221 , VAL A:225BINDING SITE FOR RESIDUE CLA A 1148
042EC6SOFTWAREUNK K:71BINDING SITE FOR RESIDUE CLA K 1153
043EC7SOFTWARELEU A:653 , LEU A:657 , CLA A:9011 , LEU B:624 , PHE B:650 , HIS B:654 , TRP B:657 , TYR B:717 , PHE B:719 , THR B:720 , TYR B:721 , PHE B:724 , CLA B:9012 , CLA B:9022BINDING SITE FOR RESIDUE CLA B 9010
044EC8SOFTWARETYR A:606 , ASN A:607 , SER A:610 , TRP A:652 , ALA A:661 , ILE A:665 , HIS A:683 , TRP A:686 , TYR A:738 , GLY A:742 , THR A:745 , THR A:746 , PHE A:749 , LEU B:624 , CLA B:9010 , CLA B:9012BINDING SITE FOR RESIDUE CLA A 9011
045EC9SOFTWARELEU A:677 , LEU A:680 , GLY A:681 , PHE A:684 , BCR A:6011 , CLA A:9011 , CLA A:9013 , LEU B:434 , TRP B:582 , ASN B:585 , TRP B:589 , LEU B:616 , CLA B:9010BINDING SITE FOR RESIDUE CLA B 9012
046FC1SOFTWAREPHE A:684 , ALA A:687 , PHE A:688 , LEU A:690 , MET A:691 , PHE A:694 , TRP A:700 , LEU B:427 , GLY B:430 , PHE B:581 , TRP B:582 , CLA B:9012BINDING SITE FOR RESIDUE CLA A 9013
047FC2SOFTWAREPHE A:458 , ILE A:462 , TRP A:604 , ASN A:607 , ILE A:649 , TYR A:738 , TRP B:648 , LEU B:651 , PHE B:652 , HIS B:654 , LEU B:655 , ALA B:658 , CLA B:9010 , CLA B:9023BINDING SITE FOR RESIDUE CLA B 9022
048FC3SOFTWAREASN A:447 , CYS A:450 , PHE A:455 , ILE A:555 , LEU A:600 , PHE A:603 , TRP A:604 , LEU B:655 , THR B:659 , PHE B:661 , MET B:662 , TYR B:670 , LEU B:674 , CLA B:1239 , BCR B:6017 , CLA B:9022BINDING SITE FOR RESIDUE CLA B 9023
049FC4SOFTWAREILE B:25 , HIS B:29 , CLA B:1203BINDING SITE FOR RESIDUE CLA B 1201
050FC5SOFTWAREHIS B:29 , ILE B:46 , GLN B:53 , LEU B:54 , ILE B:330 , HIS B:331 , GLN B:333 , LEU B:334 , ALA B:337 , LEU B:341 , CLA B:1203 , CLA B:1210 , CLA B:1221BINDING SITE FOR RESIDUE CLA B 1202
051FC6SOFTWAREILE B:57 , TRP B:60 , CLA B:1201 , CLA B:1202 , CLA B:1225 , CLA B:1226BINDING SITE FOR RESIDUE CLA B 1203
052FC7SOFTWARELEU B:59 , PHE B:66 , TRP B:70 , ALA B:90 , CLA B:1205 , PRO I:5 , PHE I:8 , VAL I:12 , BCR I:6018BINDING SITE FOR RESIDUE CLA I 1204
053FC8SOFTWAREALA B:88 , HIS B:89 , ASN B:114 , ASN B:115 , ALA B:116 , TYR B:117 , SER B:118 , TRP B:646 , MET B:649 , CLA B:1224 , BCR B:6017 , CLA I:1204BINDING SITE FOR RESIDUE CLA B 1205
054FC9SOFTWARETHR A:466 , LEU A:470 , ASP B:93 , HIS B:95 , PHE B:96 , VAL B:645 , TRP B:648 , BCR B:6017BINDING SITE FOR RESIDUE CLA B 1206
055GC1SOFTWARECLA A:1132 , PRO B:94 , HIS B:95 , GLY H:61 , LEU H:65 , VAL I:9 , GLY I:13 , LEU I:14 , BCR I:6018 , PRO L:73 , ALA L:87 , GLY L:90 , LEU L:91 , BCR L:6020BINDING SITE FOR RESIDUE CLA B 1207
056GC2SOFTWARELEU B:151 , HIS B:156 , TRP B:161 , LYS B:162 , TRP B:167 , CLA B:1209 , CLA B:1210 , ASN G:39BINDING SITE FOR RESIDUE CLA B 1208
057GC3SOFTWARETRP B:167 , ASN B:170 , SER B:173 , HIS B:177 , THR B:293 , ASN B:294 , CLA B:1208 , CLA B:1210 , CLA B:1217 , GLN G:38 , ASN G:39 , MET G:41BINDING SITE FOR RESIDUE CLA B 1209
058GC4SOFTWAREHIS B:50 , ARG B:174 , HIS B:178 , LEU B:182 , CLA B:1202 , CLA B:1208 , CLA B:1209 , CLA B:1241BINDING SITE FOR RESIDUE CLA B 1210
059GC5SOFTWAREALA B:189 , TRP B:190 , HIS B:193 , HIS B:196 , VAL B:197 , ARG B:208 , PHE B:212BINDING SITE FOR RESIDUE CLA B 1211
060GC6SOFTWAREHIS B:196 , PHE B:212 , LEU B:213 , LEU B:222 , LEU B:225 , ILE B:254 , LEU B:255BINDING SITE FOR RESIDUE CLA B 1212
061GC7SOFTWAREASN B:231 , LEU B:255 , HIS B:275 , LEU B:278 , ALA B:279 , TRP B:493 , CLA B:1214BINDING SITE FOR RESIDUE CLA B 1213
062GC8SOFTWAREILE B:257 , VAL B:273 , HIS B:275 , HIS B:276 , ALA B:279 , ILE B:280 , HIS B:351 , LEU B:355 , CLA B:1213 , CLA B:1223 , CLA B:1231BINDING SITE FOR RESIDUE CLA B 1214
063GC9SOFTWARETRP B:123 , THR B:126 , ILE B:127 , SER B:186 , TRP B:190 , LEU B:194 , VAL B:273 , HIS B:276 , HIS B:277 , ILE B:280 , LEU B:347 , VAL B:348 , MET B:352 , CLA B:1225BINDING SITE FOR RESIDUE CLA B 1215
064HC1SOFTWAREPHE B:183 , LEU B:283 , PHE B:284 , ILE B:286 , MET B:290 , TYR B:291 , ILE B:304 , CLA B:1218 , CLA B:1220 , CLA B:1221 , CLA B:1242BINDING SITE FOR RESIDUE CLA B 1216
065HC2SOFTWAREHIS B:177 , LEU B:289 , THR B:293 , PHE B:295 , CLA B:1209 , LEU G:18 , PHE G:21BINDING SITE FOR RESIDUE CLA B 1217
066HC3SOFTWARECLA 1:1012 , ILE B:286 , GLY B:287 , LEU B:289 , MET B:290 , TYR B:291 , ILE B:297 , HIS B:299 , CLA B:1216 , CLA B:1219BINDING SITE FOR RESIDUE CLA B 1218
067HC4SOFTWAREHIS B:299 , TYR B:303 , HIS B:308 , PRO B:310 , PRO B:311 , CLA B:1218 , CLA B:1220BINDING SITE FOR RESIDUE CLA B 1219
068HC5SOFTWAREILE B:304 , HIS B:308 , PRO B:310 , PRO B:311 , VAL B:407 , LEU B:408 , CLA B:1216 , CLA B:1219 , CLA B:1221 , CLA B:1227 , CLA B:1242BINDING SITE FOR RESIDUE CLA B 1220
069HC6SOFTWAREALA B:171 , ARG B:174 , LEU B:175 , HIS B:178 , PHE B:183 , ILE B:326 , ASN B:327 , CLA B:1202 , CLA B:1216 , CLA B:1220BINDING SITE FOR RESIDUE CLA B 1221
070HC7SOFTWARESER B:346 , LEU B:347 , GLN B:350 , GLN B:376 , THR B:530 , THR B:531 , CLA B:1234 , CLA B:1235 , CLA B:1236BINDING SITE FOR RESIDUE CLA B 1222
071HC8SOFTWAREGLN B:350 , HIS B:351 , SER B:354 , LEU B:355 , CLA B:1214 , CLA B:1231BINDING SITE FOR RESIDUE CLA B 1223
072HC9SOFTWARETRP B:60 , TYR B:117 , SER B:118 , ALA B:370 , HIS B:374 , ILE B:378 , ILE B:718 , PHE B:719 , ALA B:722 , ILE B:726 , CLA B:1205 , CLA B:1225BINDING SITE FOR RESIDUE CLA B 1224
073IC1SOFTWAREVAL B:120 , TRP B:123 , LEU B:341 , ILE B:344 , THR B:345 , VAL B:348 , MET B:352 , TYR B:358 , LEU B:371 , HIS B:374 , HIS B:375 , ILE B:378 , ILE B:382 , CLA B:1203 , CLA B:1215 , CLA B:1224BINDING SITE FOR RESIDUE CLA B 1225
074IC2SOFTWARELEU B:334 , LEU B:338 , PHE B:381 , GLY B:385 , HIS B:389 , PHE B:576 , CLA B:1203BINDING SITE FOR RESIDUE CLA B 1226
075IC3SOFTWAREARG B:317 , ARG B:410 , MET B:411 , HIS B:414 , CLA B:1220 , CLA B:1228 , CLA B:1242BINDING SITE FOR RESIDUE CLA B 1227
076IC4SOFTWARETRP A:709 , HIS B:421 , TRP B:424 , CLA B:1138 , CLA B:1227 , CLA B:1236 , BCR F:6016BINDING SITE FOR RESIDUE CLA B 1228
077IC5SOFTWARETRP B:424 , LEU B:427 , PHE B:428 , PHE B:431 , HIS B:432 , CLA B:1138 , CLA B:1230 , PHE F:90 , ALA F:94 , GLY F:95 , GLY F:98BINDING SITE FOR RESIDUE CLA B 1229
078IC6SOFTWAREGLY B:435 , VAL B:438 , HIS B:439 , CLA B:1229BINDING SITE FOR RESIDUE CLA B 1230
079IC7SOFTWAREILE B:463 , HIS B:467 , PHE B:509 , CLA B:1214 , CLA B:1223 , CLA B:1232 , CLA B:1234BINDING SITE FOR RESIDUE CLA B 1231
080IC8SOFTWAREPRO B:484 , ALA B:485 , ASN B:487 , ALA B:488 , GLY B:489 , TRP B:493 , CLA B:1231 , CLA G:1233BINDING SITE FOR RESIDUE CLA B 1232
081IC9SOFTWAREALA B:488 , CLA B:1232 , PRO G:4 , SER G:5BINDING SITE FOR RESIDUE CLA G 1233
082JC1SOFTWARETYR B:353 , PHE B:459 , ALA B:460 , ILE B:463 , GLN B:464 , HIS B:467 , PHE B:509 , LEU B:510 , ILE B:512 , HIS B:520 , VAL B:590 , TYR B:593 , TRP B:594 , CLA B:1222 , CLA B:1231 , CLA B:1235 , CLA B:1236BINDING SITE FOR RESIDUE CLA B 1234
083JC2SOFTWARELEU B:429 , PRO B:457 , ILE B:458 , PHE B:459 , ALA B:460 , PHE B:517 , HIS B:521 , ALA B:524 , HIS B:528 , CLA B:1222 , CLA B:1234 , CLA B:1236 , PHE F:83 , CLA F:1302BINDING SITE FOR RESIDUE CLA B 1235
084JC3SOFTWAREILE B:418 , HIS B:421 , LEU B:422 , ALA B:524 , LEU B:527 , HIS B:528 , CLA B:1222 , CLA B:1228 , CLA B:1234 , CLA B:1235BINDING SITE FOR RESIDUE CLA B 1236
085JC4SOFTWARESER A:444 , ASN A:447 , ILE A:451 , CLA A:1131 , LEU B:678 , HIS B:682 , CLA B:1238 , BCR B:6017 , BCR L:6020BINDING SITE FOR RESIDUE CLA B 1237
086JC5SOFTWARETHR B:18 , TRP B:22 , ALA B:679 , HIS B:682 , TRP B:693 , ARG B:694 , PRO B:697 , VAL B:698 , CLA B:1237 , MET I:21 , PHE I:25 , TYR L:102BINDING SITE FOR RESIDUE CLA B 1238
087JC6SOFTWAREPHE B:652 , LEU B:655 , VAL B:656 , PHE B:663 , VAL B:708 , VAL B:711 , HIS B:712 , PQN B:5002 , BCR B:6017 , CLA B:9023 , MET I:21 , BCR I:6018BINDING SITE FOR RESIDUE CLA B 1239
088JC7SOFTWARECLA B:1138 , ILE F:93 , ILE F:97BINDING SITE FOR RESIDUE CLA F 1240
089JC8SOFTWAREILE B:57 , PHE B:58 , LEU B:182 , CLA B:1210BINDING SITE FOR RESIDUE CLA B 1241
090JC9SOFTWARESER B:340 , PHE B:387 , MET B:411 , CLA B:1216 , CLA B:1220 , CLA B:1227BINDING SITE FOR RESIDUE CLA B 1242
091KC1SOFTWAREPRO B:310 , PRO B:311 , GLY B:312 , ARG B:314BINDING SITE FOR RESIDUE CLA B 1301
092KC2SOFTWAREGLY 1:190 , ASP 1:191 , PHE B:459 , CLA B:1235 , GLY F:75 , GLN F:77 , TRP F:80 , CLA F:1303 , BCR F:6016BINDING SITE FOR RESIDUE CLA F 1302
093KC3SOFTWARECLA F:1302 , BCR F:6016BINDING SITE FOR RESIDUE CLA F 1303
094KC4SOFTWAREILE 4:103 , TRP 4:106 , CLA 4:4012BINDING SITE FOR RESIDUE CLA 4 1304
095KC5SOFTWARETRP F:80BINDING SITE FOR RESIDUE CLA F 1305
096KC6SOFTWARECLA 4:4005BINDING SITE FOR RESIDUE CLA F 1306
097KC7SOFTWARECLA F:4015BINDING SITE FOR RESIDUE CLA J 1307
098KC8SOFTWARESER J:21BINDING SITE FOR RESIDUE CLA J 1308
099KC9SOFTWAREARG G:28 , PRO G:63BINDING SITE FOR RESIDUE CLA G 1248
100LC1SOFTWAREPHE F:134 , CLA J:1307BINDING SITE FOR RESIDUE CLA F 4015
101LC2SOFTWAREASN H:33 , SER H:34 , GLN H:36 , CLA H:1505 , TRP L:35 , TYR L:36 , LEU L:40 , GLU L:55 , LEU L:58 , ALA L:59 , TRP L:153 , CLA L:1502 , CLA L:1504BINDING SITE FOR RESIDUE CLA H 1501
102LC3SOFTWARELEU B:687 , ALA B:688 , CLA H:1501 , TYR L:36 , LEU L:40 , GLU L:55 , VAL L:56 , ALA L:59 , HIS L:60 , LEU L:63 , LEU L:64 , CLA L:1504 , BCR L:6020BINDING SITE FOR RESIDUE CLA L 1502
103LC4SOFTWAREVAL L:65 , GLY L:66 , PRO L:67 , LEU L:161 , PRO L:164 , TYR L:165BINDING SITE FOR RESIDUE CLA L 1503
104LC5SOFTWARECLA A:1136 , CLA H:1501 , LEU L:32 , TYR L:36 , CLA L:1130 , CLA L:1502BINDING SITE FOR RESIDUE CLA L 1504
105LC6SOFTWARELEU H:35 , GLN H:36 , CLA H:1501BINDING SITE FOR RESIDUE CLA H 1505
106LC7SOFTWARECLA 2:2005 , GLU J:28 , ARG J:31BINDING SITE FOR RESIDUE CLA J 2107
107LC8SOFTWAREHIS 1:46 , ARG 1:152 , CLA 4:1009BINDING SITE FOR RESIDUE CLA 1 1004
108LC9SOFTWARESER 1:42 , TRP 1:49 , CLA 1:1012BINDING SITE FOR RESIDUE CLA 1 1005
109MC1SOFTWAREALA 1:53 , GLY 1:56 , ILE 1:57 , VAL 1:59 , PRO 1:60 , CLA 1:1013BINDING SITE FOR RESIDUE CLA 1 1006
110MC2SOFTWARECLA 1:1004BINDING SITE FOR RESIDUE CLA 4 1009
111MC3SOFTWARELYS 1:70 , GLN 1:72 , TRP 1:74 , CLA 1:1006BINDING SITE FOR RESIDUE CLA 1 1013
112MC4SOFTWAREGLU 1:109BINDING SITE FOR RESIDUE CLA 1 1011
113MC5SOFTWAREALA 1:106 , HIS 1:110 , CLA 1:1005 , CLA B:1218BINDING SITE FOR RESIDUE CLA 1 1012
114MC6SOFTWAREASN 1:150BINDING SITE FOR RESIDUE CLA 1 1002
115MC7SOFTWAREGLY 1:160 , PHE 1:161 , HIS 1:180 , LEU 1:181 , ALA 1:182 , CLA 1:1008BINDING SITE FOR RESIDUE CLA 1 1003
116MC8SOFTWAREHIS 1:180 , CLA 1:1003BINDING SITE FOR RESIDUE CLA 1 1008
117MC9SOFTWARECLA 2:2007BINDING SITE FOR RESIDUE CLA 3 2009
118NC1SOFTWAREASN 2:166 , LEU 2:169 , ALA 2:170BINDING SITE FOR RESIDUE CLA 2 2004
119NC2SOFTWARECLA J:2107BINDING SITE FOR RESIDUE CLA 2 2005
120NC3SOFTWAREGLY 2:61 , ILE 2:62BINDING SITE FOR RESIDUE CLA 2 2006
121NC4SOFTWAREGLU 2:98 , LEU 2:99BINDING SITE FOR RESIDUE CLA 2 2013
122NC5SOFTWAREALA 2:105 , ARG 2:109BINDING SITE FOR RESIDUE CLA 2 2011
123NC6SOFTWARELEU 2:99 , GLY 2:103 , GLU 2:106BINDING SITE FOR RESIDUE CLA 2 2012
124NC7SOFTWARECLA 2:2002 , CLA 3:2009BINDING SITE FOR RESIDUE CLA 2 2007
125NC8SOFTWAREILE 2:164 , CLA 2:2007BINDING SITE FOR RESIDUE CLA 2 2002
126NC9SOFTWAREALA 2:177 , TRP 2:178 , HIS 2:181 , TYR 2:183 , CLA 2:2008BINDING SITE FOR RESIDUE CLA 2 2003
127OC1SOFTWAREALA 2:197 , CLA 2:2003BINDING SITE FOR RESIDUE CLA 2 2008
128OC2SOFTWAREASN B:499BINDING SITE FOR RESIDUE CLA 3 3009
129OC3SOFTWAREVAL 3:185 , LYS 3:186BINDING SITE FOR RESIDUE CLA 3 3004
130OC4SOFTWAREMET 3:67 , LEU 3:196 , PHE 3:199BINDING SITE FOR RESIDUE CLA 3 3005
131OC5SOFTWARECLA 3:3011BINDING SITE FOR RESIDUE CLA 3 3012
132OC6SOFTWAREALA 3:73 , GLU 3:77 , GLY 3:80 , LYS 3:81BINDING SITE FOR RESIDUE CLA 3 3006
133OC7SOFTWAREASP 3:110 , GLU 3:118BINDING SITE FOR RESIDUE CLA 3 3013
134OC8SOFTWAREVAL 3:116 , MET 3:119BINDING SITE FOR RESIDUE CLA 3 3010
135OC9SOFTWAREPHE 3:65 , LEU 3:68 , CLA 3:3002BINDING SITE FOR RESIDUE CLA 3 3001
136PC1SOFTWARECLA 3:3012BINDING SITE FOR RESIDUE CLA 3 3011
137PC2SOFTWAREARG 3:64 , CLA 3:3001 , CLA 3:3007BINDING SITE FOR RESIDUE CLA 3 3002
138PC3SOFTWARECLA 3:3002BINDING SITE FOR RESIDUE CLA 3 3007
139PC4SOFTWARETYR 3:198 , GLN 3:201BINDING SITE FOR RESIDUE CLA 3 3003
140PC5SOFTWARELEU 4:147BINDING SITE FOR RESIDUE CLA 4 4009
141PC6SOFTWAREGLU 4:44 , ILE 4:154 , ALA 4:155 , ARG 4:158BINDING SITE FOR RESIDUE CLA 4 4004
142PC7SOFTWAREASN 4:47 , PHE 4:164 , CLA 4:4012 , CLA F:1306BINDING SITE FOR RESIDUE CLA 4 4005
143PC8SOFTWAREGLY 4:57 , LEU 4:60 , TYR 4:76BINDING SITE FOR RESIDUE CLA 4 4006
144PC9SOFTWARELEU 4:90 , PHE 4:95 , CLA 4:4010BINDING SITE FOR RESIDUE CLA 4 4013
145QC1SOFTWARECLA 4:4013BINDING SITE FOR RESIDUE CLA 4 4010
146QC2SOFTWAREGLN 4:42 , ARG 4:49 , ARG 4:105 , ASP 4:108 , SER 4:114 , PRO 4:119BINDING SITE FOR RESIDUE CLA 4 4011
147QC3SOFTWAREALA 4:43 , VAL 4:46 , TRP 4:50 , GLU 4:102 , TRP 4:106 , CLA 4:1304 , CLA 4:4005BINDING SITE FOR RESIDUE CLA 4 4012
148QC4SOFTWAREARG 4:49 , MET 4:52 , LEU 4:53 , ASP 4:118BINDING SITE FOR RESIDUE CLA 4 4001
149QC5SOFTWAREGLU 4:151BINDING SITE FOR RESIDUE CLA 4 4007
150QC6SOFTWAREASN 4:156 , LEU 4:159BINDING SITE FOR RESIDUE CLA 4 4002
151QC7SOFTWARELEU 4:162 , PHE 4:167 , GLN 4:170BINDING SITE FOR RESIDUE CLA 4 4003
152QC8SOFTWAREHIS 4:185 , ILE 4:186BINDING SITE FOR RESIDUE CLA 4 4008
153QC9SOFTWARECYS A:581 , ASP A:582 , CYS A:590 , CYS B:559 , ASP B:560 , GLY B:561 , PRO B:562 , CYS B:568 , TRP B:667BINDING SITE FOR RESIDUE SF4 B 3101
154RC1SOFTWARECYS C:21 , VAL C:25 , CYS C:48 , VAL C:49 , GLY C:50 , CYS C:51 , LYS C:52 , ARG C:53 , CYS C:54BINDING SITE FOR RESIDUE SF4 C 3102
155RC2SOFTWARECYS C:11 , ILE C:12 , CYS C:17 , VAL C:18 , CYS C:58 , PRO C:59BINDING SITE FOR RESIDUE SF4 C 3103
156RC3SOFTWARETRP A:55 , MET A:691 , PHE A:692 , SER A:695 , GLY A:696 , TRP A:700 , ALA A:724 , LEU A:725 , CLA A:1140 , CLA B:1138 , CLA F:1139BINDING SITE FOR RESIDUE PQN A 5001
157RC4SOFTWAREMET B:662 , PHE B:663 , SER B:666 , TRP B:667 , ARG B:668 , TRP B:671 , ALA B:699 , LEU B:700 , ALA B:705 , CLA B:1239 , BCR B:6017BINDING SITE FOR RESIDUE PQN B 5002
158RC5SOFTWAREGLY A:681 , PHE A:684 , ALA A:744 , TRP A:747 , CLA A:1126 , CLA B:9012BINDING SITE FOR RESIDUE BCR A 6011
159RC6SOFTWARECLA B:1228 , GLY F:95 , TRP F:99 , LEU F:144 , CLA F:1302 , CLA F:1303BINDING SITE FOR RESIDUE BCR F 6016
160RC7SOFTWARETRP B:648 , MET B:649 , PHE B:652 , CLA B:1205 , CLA B:1206 , CLA B:1237 , CLA B:1239 , PQN B:5002 , CLA B:9023BINDING SITE FOR RESIDUE BCR B 6017
161RC8SOFTWARECLA B:1207 , CLA B:1239 , VAL I:12 , PHE I:16 , CLA I:1204 , BCR L:6020BINDING SITE FOR RESIDUE BCR I 6018
162RC9SOFTWARECLA A:1131 , CLA B:1207 , CLA B:1237 , BCR I:6018 , LEU L:91 , CLA L:1502BINDING SITE FOR RESIDUE BCR L 6020

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2O01)

(-) Cis Peptide Bonds  (139, 139)

Asymmetric/Biological Unit
No.Residues
1Phe A:31 -Glu A:32
2Glu A:32 -Gln A:33
3Ala A:35 -Lys A:36
4Ser A:80 -Ala A:81
5Ala A:81 -His A:82
6Gln A:483 -Leu A:484
7Val A:487 -Phe A:488
8Ala A:489 -Gln A:490
9Gln A:490 -Trp A:491
10Trp A:491 -Ile A:492
11Ile A:492 -Gln A:493
12Ile A:555 -Leu A:556
13Ile B:5 -Pro B:6
14Trp B:70 -Gln B:71
15Gln B:71 -Gly B:72
16His B:83 -Val B:84
17Pro B:310 -Pro B:311
18Ser C:4 -Val C:5
19Ile C:12 -Gly C:13
20Cys C:48 -Val C:49
21Glu D:19 -Leu D:20
22Asp D:21 -Pro D:22
23Ser D:26 -Pro D:27
24Pro D:72 -Asn D:73
25Arg D:102 -Val D:103
26Pro D:105 -Ser D:106
27Val D:109 -Gln D:110
28His D:113 -Pro D:114
29Gly D:150 -Lys D:151
30Tyr D:154 -Asp D:155
31Asp D:155 -Leu D:156
32Trp E:45 -Phe E:46
33Gly F:4 -Leu F:5
34Ala F:37 -Pro F:38
35Gly F:57 -Lys F:58
36Leu F:149 -Val F:150
37Val F:150 -Asp F:151
38Asp F:151 -Asn F:152
39Ala G:32 -Lys G:33
40Lys G:33 -Gln G:34
41Arg G:50 -Ala G:51
42Ala G:82 -Tyr G:83
43Tyr G:83 -Tyr G:84
44Ile G:85 -Leu G:86
45Thr G:88 -Ala G:89
46Ala G:89 -Ser G:90
47Phe G:97 -Phe G:98
48Tyr H:24 -Gly H:25
49Gly H:25 -Ser H:26
50Ser H:26 -Asp H:27
51Glu H:41 -Thr H:42
52Thr H:42 -Phe H:43
53Phe H:43 -Ala H:44
54Ala H:44 -Ala H:45
55Pro H:73 -Gln H:74
56Gln H:74 -Asp H:75
57Gly H:90 -Pro H:91
58Pro H:91 -Arg H:92
59Arg H:92 -Gly H:93
60Gly H:93 -Lys H:94
61Phe I:25 -Leu I:26
62Arg J:2 -Asp J:3
63Phe J:4 -Lys J:5
64Lys J:5 -Thr J:6
65Tyr L:79 -Ala L:80
66Pro L:112 -Ser L:113
67Ser L:113 -Ile L:114
68Ala L:115 -Pro L:116
69Leu L:118 -Thr L:119
70Thr L:119 -Leu L:120
71Tyr L:166 -Phe L:167
72Phe L:167 -Lys L:168
73Val N:2 -Ile N:3
74Glu N:36 -Phe N:37
75Gly N:38 -Ser N:39
76Ser N:39 -Cys N:40
77Pro N:43 -Glu N:44
78Glu N:44 -Asn N:45
79Thr N:47 -Gly N:48
80Gly N:48 -Cys N:49
81Lys N:54 -Gln N:55
82Leu N:61 -Ser N:62
83Asp N:63 -Asp N:64
84Glu N:70 -Gly N:71
85Lys N:74 -Tyr N:75
86Cys N:77 -Gly N:78
87Ser N:79 -Asn N:80
88Phe N:82 -Trp N:83
89Gly 1:7 -Glu 1:8
90Arg 1:10 -Pro 1:11
91Gly 1:16 -Ser 1:17
92Ser 1:17 -Ala 1:18
93Pro 1:19 -Gly 1:20
94Phe 1:22 -Gly 1:23
95Gly 1:23 -Phe 1:24
96Leu 1:27 -Gly 1:28
97Arg 1:38 -Tyr 1:39
98Trp 1:68 -Val 1:69
99Gln 1:81 -Ala 1:82
100Ala 1:82 -Thr 1:83
101Tyr 1:84 -Leu 1:85
102Gly 1:86 -Asn 1:87
103Asn 1:87 -Pro 1:88
104Trp 1:91 -Gly 1:92
105Pro 1:118 -Glu 1:119
106Leu 1:181 -Ala 1:182
107Asp 1:183 -Pro 1:184
108Asn 1:188 -Ile 1:189
109Ile 1:189 -Gly 1:190
110Leu 2:19 -Asp 2:20
111Leu 2:32 -Gly 2:33
112Gly 2:33 -Leu 2:34
113Thr 2:93 -Leu 2:94
114Leu 2:114 -Asn 2:115
115Pro 2:145 -Leu 2:146
116Ser 2:152 -Pro 2:153
117Pro 2:153 -Gln 2:154
118Thr 2:186 -Gly 2:187
119Ile 2:189 -Asp 2:190
120Asn 2:191 -Leu 2:192
121Leu 2:192 -Phe 2:193
122Ala 2:194 -His 2:195
123Trp 3:54 -Leu 3:55
124Leu 3:55 -Ala 3:56
125Ile 3:78 -Leu 3:79
126Lys 3:81 -Ala 3:82
127Gly 3:83 -Leu 3:84
128Leu 3:84 -Ile 3:85
129Gly 3:140 -Lys 3:141
130Pro 3:209 -Tyr 3:210
131Asn 3:212 -Leu 3:213
132Leu 3:217 -Ala 3:218
133Ala 4:77 -Ala 4:78
134Ala 4:85 -Ser 4:86
135Pro 4:112 -Gly 4:113
136Asn 4:116 -Gln 4:117
137Ile 4:120 -Phe 4:121
138Tyr 4:124 -Ser 4:125
139Ser 4:125 -Leu 4:126

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2O01)

(-) PROSITE Motifs  (4, 6)

Asymmetric/Biological Unit (4, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
14FE4S_FER_2PS51379 4Fe-4S ferredoxin-type iron-sulfur binding domain profile.PSAC_PEA1-31
39-68
  1-
C:39-68
24FE4S_FER_1PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature.PSAC_PEA11-22
48-59
  2C:11-22
C:48-59
3PHOTOSYSTEM_I_PSAGKPS01026 Photosystem I psaG and psaK proteins signature.PSAG_SPIOL134-151  1G:65-82
4PHOTOSYSTEM_I_PSAABPS00419 Photosystem I psaA and psaB proteins signature.PSAB_PEA559-568  1B:559-568
PSAA_PEA581-590  1A:581-590

(-) Exons   (0, 0)

(no "Exon" information available for 2O01)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain 1 from PDB  Type:PROTEIN  Length:175
 aligned with CAB6_ARATH | Q01667 from UniProtKB/Swiss-Prot  Length:241

    Alignment length:187
                                    58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       
           CAB6_ARATH    49 MPGEPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD 235
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2o01100 1:5-191 Chlorophyll a-b binding protein                                                                                                                                             CATH domains
               Pfam domains -----Chloroa_b-bind-2o01101 1:10-166                                                                                                                              ------------------------- Pfam domains
         Sec.struct. author .....................................hhhhhhhhhhhhhhhhhh..................................hhhhhhhhhhhhhhhhhhhh..............------------.....hhhhhhhhhhhhhhhhhhhhhh......................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o01 1   5 MPGEPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGA------------LEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD 191
                                    14        24        34        44        54        64        74        84        94       104       114       124  |      -     | 144       154       164       174       184       
                                                                                                                                                    127          140                                                   

Chain 2 from PDB  Type:PROTEIN  Length:166
 aligned with Q41038_PEA | Q41038 from UniProtKB/TrEMBL  Length:269

    Alignment length:186
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253      
           Q41038_PEA    74 PPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHSRWAMLGAAGIFIPEFLTKLGILNTPSWYTAGEQEYFTDTTTLFIVELVFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH 259
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains --Chloroa_b-bind-2o01201 2:18-182                                                                                                                                      ------------------- Pfam domains
         Sec.struct. author ..............................hhhhhhhhhhhhhhhhhhhhhhhhh........................hhhhhhhhhhhhhhhhh.........--------------------...............hhhhhhhhhhhhhhhhhhhhhhh....................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2o01 2  16 PEWLDGSLPGDFGFDPLGLSSDPESLRWNVQAELVHSRWAMLGAAGIFIPEFLTKLGILNTPSWYTAGEQEYFTDTTTLFIVELVFIGWAEGRRWADILNPGCVN--------------------LWFDPLGWGSASPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGH 201
                                    25        35        45        55        65        75        85        95       105       115    |    -         -     | 145       155       165       175       185       195      
                                                                                                                                  120                  141                                                            

Chain 3 from PDB  Type:PROTEIN  Length:115
 aligned with LHCA3_ARATH | Q9SY97 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:165
                                   104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254     
          LHCA3_ARATH    95 WLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLA 259
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2o01300 3:54-218 Photosystem I psaA/              psaB protein                                                                                                        CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhh..............--------------...........hhhhhhhhhhhhhhhhhhh.............------------------------------------hhhhhhhhhhhhhhhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o01 3  54 WLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAET--------------TYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLG------------------------------------KEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLA 218
                                    63        73        83     |   -         -|      113       123       133       143  |      -         -         -       183       193       203       213     
                                                              89            104                                       146                                  183                                   

Chain 4 from PDB  Type:PROTEIN  Length:165
 aligned with CB24_PEA | Q9SQL2 from UniProtKB/Swiss-Prot  Length:252

    Alignment length:165
                                    94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244     
             CB24_PEA    85 PENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTL 249
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2o01401 4:34-170 Chlorophyll a-b binding protein                                                                                         ---------------------------- CATH domains
               Pfam domains Chloroa_b-bind-2o01401 4:34-172                                                                                                            -------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhh.............................hhhhhhhhhhhhhhhhhhhhhh.........................................hhhhhhhhhhhhhhhhhhhhh......................... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o01 4  34 PENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTL 198
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193     

Chain A from PDB  Type:PROTEIN  Length:728
 aligned with PSAA_PEA | P05310 from UniProtKB/Swiss-Prot  Length:758

    Alignment length:728
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750        
             PSAA_PEA    31 FEQWAKPGHFSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSIIFLWLSGMYFHGARFSNYEAWLNDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALVFAGLMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWARHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYADFLTFRGGLDPLTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLYEILTTSWHAQLSINLAMLGSLTIVVAQHMYSMPPYPYLATDYATQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPGTTAPGATASTSLTWGGGDLVAVGNKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGTINDQGVVTHITAGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG 758
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------PsaA_PsaB-2o01A01 A:40-752                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ------ Pfam domains
         Sec.struct. author ....................hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhh....................................hhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh.................hhhhhhh..............hhhhhh.................hhhhhhhhhhhhhhhhhhhhh............hhhhh......................hhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......................hhhhhhhh....................................hhhhhhhhhhhhhhhhhhhhhhhhhhhh...............................hhhhhhhhhhhhhhhhhhhhhhhhhhh....................hhhhhh..hhhhhhhhhhh.hhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHOTOSYSTE------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o01 A  31 FEQWAKPGHFSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSIIFLWLSGMYFHGARFSNYEAWLNDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALVFAGLMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYADFLTFRGGLDPLTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLYEILTTSWHAQLSINLAMLGSLTIVVAQHMYSMPPYPYLATDYATQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPGTTAPGATASTSLTWGGGDLVAVGNKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGTINDQGVVTHITAGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG 758
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750        

Chain B from PDB  Type:PROTEIN  Length:732
 aligned with PSAB_PEA | P05311 from UniProtKB/Swiss-Prot  Length:734

    Alignment length:732
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731  
             PSAB_PEA     2 ALRIPRFSQGIAQDPTTRRIWFGIATAHDFESHDDITEGRLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFEAWVQDPFHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNNAYSGVYQWWYTIGLRTNEDLYTGAIFLLFLSFISLLAGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWAGHLVHVAIPGSRGEYVRWNNFLDVLPYPQGLGPLLTGQWNLYAQNPSSSNHLFGTTQGAGTAILTILGGFHPQTQSLWLTDVAHHHLAIAFLFLIGGLMYRTNFGIGHSIKYILEAHIPPGGRLGRGHKGLYDTINNSIHFQLGLALASLGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGPIFFIRDYNPEQNADNVLARMLEHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKTTYGFDIPLSSTNGPALNAGRNIWLPGWLNAINENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDDFYLAVFWMLNTIGWVTFYWHWKHITLWRGNVSQFNESSTYLMGWLRDYLWLNSSQLINGITPLVCNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLVHFSVGYIFTYAAFLIASTSGKF 733
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------PsaA_PsaB-2o01B01 B:8-727                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ------ Pfam domains
         Sec.struct. author .................hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhh........................................hhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...................hhhhh...hhhhh...................................hhhhhhhhhhhhhhhhhhhh..........hhhhhhhhh.............hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhh.........................hhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhh..............................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHOTOSYSTE--------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2o01 B   2 ALRIPRFSQGIAQDPTTRRIWFGIATAHDFESHDDITEGRLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFEAWVQDPFHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNNAYSGVYQWWYTIGLRTNEDLYTGAIFLLFLSAISLLAGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWAGHLVHVAIPGSRGEYVRWNNFLDVLPYPQGLGPLLTGQWNLYAQNPSSSNHLFGTTQGAGTAILTILGGFHPQTQSLWLTDVAHHHLAIAFLFLIGGLMYRTNFGIGHSIKYILEAHIPPGGRLGRGHKGLYDTINNSIHFQLGLALASLGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGPIFFIRDYNPEQNADNVLARMLEHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKTTYGFDIPLSSTNGPALNAGRNIWLPGWLNAINENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDDFYLAVFWMLNTIGWVTFYWHWKHITLWRGNVSQFNESSTYLMGWLRDYLWLNSSQLINGITPLVCNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLVHFSVGYIFTYAAFLIASTSGKF 733
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731  

Chain C from PDB  Type:PROTEIN  Length:80
 aligned with PSAC_PEA | P10793 from UniProtKB/Swiss-Prot  Length:81

    Alignment length:80
                                    11        21        31        41        51        61        71        81
             PSAC_PEA     2 SHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY  81
               SCOP domains -------------------------------------------------------------------------------- SCOP domains
               CATH domains 2o01C00 C:2-81  [code=3.30.70.20, no name defined]                               CATH domains
           Pfam domains (1) --------Fer4_7-2o01C01 C:10-62                               ------------------- Pfam domains (1)
           Pfam domains (2) --------Fer4_9-2o01C02 C:10-63                                ------------------ Pfam domains (2)
         Sec.struct. author ................................................................................ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) 4FE4S_FER_2  PDB: -           -------4FE4S_FER_2  PDB: C:39-68     ------------- PROSITE (1)
                PROSITE (2) ---------4FE4S_FER_1 -------------------------4FE4S_FER_1 ---------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------- Transcript
                 2o01 C   2 SHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY  81
                                    11        21        31        41        51        61        71        81

Chain D from PDB  Type:PROTEIN  Length:138
 aligned with PSAD_SPIOL | P12353 from UniProtKB/Swiss-Prot  Length:212

    Alignment length:138
                                    84        94       104       114       124       134       144       154       164       174       184       194       204        
           PSAD_SPIOL    75 ELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 212
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2o01D01 D:19-113  [code=3.30.1470.10, no name defined]                                         ------------------------------------------- CATH domains
               Pfam domains PsaD-2o01D01 D:19-155                                                                                                                    - Pfam domains
         Sec.struct. author ..........................eeeeeee.....................eeeee..hhhhhhhhhhhhhh...eeeeeeee..eeeeee............................................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2o01 D  19 ELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRQGVGLNMRSIGKNVSPIEVKFTGKQPYDL 156
                                    28        38        48        58        68        78        88        98       108       118       128       138       148        

Chain E from PDB  Type:PROTEIN  Length:62
 aligned with PSAE1_ARATH | Q9S831 from UniProtKB/Swiss-Prot  Length:143

    Alignment length:62
                                    90       100       110       120       130       140  
          PSAE1_ARATH    81 PKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVA 142
               SCOP domains -------------------------------------------------------------- SCOP domains
               CATH domains 2o01E00 E:30-91  [code=2.30.30.50, no name defined]            CATH domains
               Pfam domains PSI_PsaE-2o01E01 E:30-91                                       Pfam domains
         Sec.struct. author ...................................eeeee.........eeee......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------- Transcript
                 2o01 E  30 PKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVA  91
                                    39        49        59        69        79        89  

Chain F from PDB  Type:PROTEIN  Length:154
 aligned with PSAF_SPIOL | P12355 from UniProtKB/Swiss-Prot  Length:231

    Alignment length:154
                                    87        97       107       117       127       137       147       157       167       177       187       197       207       217       227    
           PSAF_SPIOL    78 DIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 231
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2o01F00 F:1-154  [code=1.10.8.110, no name defined]                                                                                                        CATH domains
               Pfam domains PSI_PsaF-2o01F01 F:1-154                                                                                                                                   Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhh................hhhhhhhhhhhhhhh.........................hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhh....................hhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o01 F   1 DIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 154
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    

Chain G from PDB  Type:PROTEIN  Length:95
 aligned with PSAG_SPIOL | P12357 from UniProtKB/Swiss-Prot  Length:167

    Alignment length:95
                                    82        92       102       112       122       132       142       152       162     
           PSAG_SPIOL    73 PSLVISLSTGLSLFLGRFVFFNFQRENMAKQVPEQNGMSHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF 167
               SCOP domains ----------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2o01G01 G:4-78 Chlorophyll a-b binding protein like                        -------------------- CATH domains
               Pfam domains PSI_PSAK-2o01G01 G:4-95                                                                     --- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhh.....................................hhhhhhhhhhhhhhh........................ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------PHOTOSYSTEM_I_PSAG---------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------- Transcript
                 2o01 G   4 PSLVISLSTGLSLFLGRFVFFNFQRENMAKQVPEQNGMSHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF  98
                                    13        23        33        43        53        63        73        83        93     

Chain H from PDB  Type:PROTEIN  Length:75
 aligned with PSAH_SPIOL | P22179 from UniProtKB/Swiss-Prot  Length:144

    Alignment length:75
                                    79        89        99       109       119       129       139     
           PSAH_SPIOL    70 WDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSANAPQDVLPITRGPQQPPKLGPRGKI 144
               SCOP domains --------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------2o01H01 H:49-71        ------------------------ CATH domains
               Pfam domains PSI_PsaH-2o01H01 H:21-95                                                    Pfam domains
         Sec.struct. author ...............hhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh........................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------- Transcript
                 2o01 H  21 WDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSANAPQDVLPITRGPQQPPKLGPRGKI  95
                                    30        40        50        60        70        80        90     

Chain I from PDB  Type:PROTEIN  Length:30
 aligned with PSAI_PEA | P17227 from UniProtKB/Swiss-Prot  Length:40

    Alignment length:30
                                    10        20        30
             PSAI_PEA     1 MINLPSLFVPLVGLLFPAVAMASLFLHVEK  30
               SCOP domains ------------------------------ SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ---PSI_8-2o01I01 I:4-28     -- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                 2o01 I   1 MINLPSLFVPLVGLLFPAVAMASLFLHVEK  30
                                    10        20        30

Chain J from PDB  Type:PROTEIN  Length:42
 aligned with PSAJ_SPIOL | P17230 from UniProtKB/Swiss-Prot  Length:44

    Alignment length:42
                                    10        20        30        40  
           PSAJ_SPIOL     1 MRDFKTYLSVAPVLSTLWFGSLAGLLIEINRFFPDALTFPFF  42
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains -----------2o01J01 J:12-36          ------ CATH domains
               Pfam domains PSI_PsaJ-2o01J01 J:1-37              ----- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                 2o01 J   1 MRDFKTYLSVAPVLSTLWFGSLAGLLIEINRFFPDALTFPFF  42
                                    10        20        30        40  

Chain K from PDB  Type:PROTEIN  Length:37
                                                                     
               SCOP domains ------------------------------------- SCOP domains
               CATH domains ------------------------------------- CATH domains
               Pfam domains ------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh.......hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------- PROSITE
                 Transcript ------------------------------------- Transcript
                 2o01 K  55 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  18
                            ||||||||64||||||||74||||||||11|||||||
                           55-UNK|||64-UNK|||73-UNK||||9-UNK|||18-UNK
                            56-UNK|||65-UNK|||74-UNK|||10-UNK||| 
                             57-UNK|| 66-UNK|| 75-UNK|| 11-UNK|| 
                              58-UNK|  67-UNK|  76-UNK|  12-UNK| 
                               59-UNK   68-UNK   77-UNK   13-UNK 
                                60-UNK   69-UNK   78-UNK   14-UNK
                                 61-UNK   70-UNK    6-UNK   15-UNK
                                  62-UNK   71-UNK    7-UNK   16-UNK
                                   63-UNK   72-UNK    8-UNK   17-UNK

Chain L from PDB  Type:PROTEIN  Length:164
 aligned with PSAL_SPIOL | Q41385 from UniProtKB/Swiss-Prot  Length:216

    Alignment length:164
                                    62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212    
           PSAL_SPIOL    53 KPTYQVIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------2o01L01 L:47-157  [code=1.20.1240.10, no name defined]                                                         ----------- CATH domains
               Pfam domains ---PsaL-2o01L01 L:8-166                                                                                                                                           -- Pfam domains
         Sec.struct. author .............................hhhhhhh.........hhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhh.............................hhhhhhhhhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2o01 L   5 KPTYQVIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 168
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164    

Chain N from PDB  Type:PROTEIN  Length:85
 aligned with Q84U30_PHAVU | Q84U30 from UniProtKB/TrEMBL  Length:170

    Alignment length:85
                                    95       105       115       125       135       145       155       165     
         Q84U30_PHAVU    86 GVIEEYLEKSKTNKELNDKKRLATTGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLDLECEGKDKYKCGSNVFWKW 170
               SCOP domains ------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2o01N01 N:1-22        --------------------------------------------------------------- CATH domains
               Pfam domains PsaN-2o01N01 N:1-85                                                                   Pfam domains
         Sec.struct. author ..............hhhhhh...hhhhhhhhhhh................................................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------- Transcript
                 2o01 N   1 GVIEEYLEKSKTNKELNDKKRLATTGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLDLECEGKDKYKCGSNVFWKW  85
                                    10        20        30        40        50        60        70        80     

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2O01)

(-) CATH Domains  (11, 12)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (14, 16)

Asymmetric/Biological Unit
(-)
Clan: 4Fe-4S (51)

(-) Gene Ontology  (36, 192)

Asymmetric/Biological Unit(hide GO term definitions)
Chain 1   (CAB6_ARATH | Q01667)
molecular function
    GO:0016168    chlorophyll binding    Interacting selectively and non-covalently with chlorophyll; any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0031409    pigment binding    Interacting selectively and non-covalently with a pigment, any general or particular coloring matter in living organisms, e.g. melanin.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0009765    photosynthesis, light harvesting    Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
    GO:0009768    photosynthesis, light harvesting in photosystem I    After a photon of light is absorbed by one of the many chlorophyll molecules, in one of the light-harvesting complexes of an antenna on photosystem I, some of the absorbed energy is transferred to the pair of chlorophyll molecules in the reaction center.
    GO:0018298    protein-chromophore linkage    The covalent or noncovalent attachment of a chromophore to a protein.
    GO:0009637    response to blue light    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.
    GO:0009409    response to cold    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
    GO:0010218    response to far red light    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
    GO:0009644    response to high light intensity    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.
    GO:0009645    response to low light intensity stimulus    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.
    GO:0010114    response to red light    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009941    chloroplast envelope    The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.
    GO:0009534    chloroplast thylakoid    Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0010287    plastoglobule    A lipoprotein particle present in chloroplasts. They are rich in non-polar lipids (triglycerides, esters) as well as in prenylquinones, plastoquinone and tocopherols. Plastoglobules are often associated with thylakoid membranes, suggesting an exchange of lipids with thylakoids.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain 2   (Q41038_PEA | Q41038)
molecular function
    GO:0016168    chlorophyll binding    Interacting selectively and non-covalently with chlorophyll; any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0009765    photosynthesis, light harvesting    Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
    GO:0018298    protein-chromophore linkage    The covalent or noncovalent attachment of a chromophore to a protein.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain 3   (LHCA3_ARATH | Q9SY97)
molecular function
    GO:0016168    chlorophyll binding    Interacting selectively and non-covalently with chlorophyll; any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0031409    pigment binding    Interacting selectively and non-covalently with a pigment, any general or particular coloring matter in living organisms, e.g. melanin.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0009765    photosynthesis, light harvesting    Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
    GO:0009768    photosynthesis, light harvesting in photosystem I    After a photon of light is absorbed by one of the many chlorophyll molecules, in one of the light-harvesting complexes of an antenna on photosystem I, some of the absorbed energy is transferred to the pair of chlorophyll molecules in the reaction center.
    GO:0018298    protein-chromophore linkage    The covalent or noncovalent attachment of a chromophore to a protein.
    GO:0009409    response to cold    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
    GO:0009735    response to cytokinin    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
    GO:0009644    response to high light intensity    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.
    GO:0009645    response to low light intensity stimulus    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009941    chloroplast envelope    The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.
    GO:0009534    chloroplast thylakoid    Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0010287    plastoglobule    A lipoprotein particle present in chloroplasts. They are rich in non-polar lipids (triglycerides, esters) as well as in prenylquinones, plastoquinone and tocopherols. Plastoglobules are often associated with thylakoid membranes, suggesting an exchange of lipids with thylakoids.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain 4   (CB24_PEA | Q9SQL2)
molecular function
    GO:0016168    chlorophyll binding    Interacting selectively and non-covalently with chlorophyll; any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0009765    photosynthesis, light harvesting    Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
    GO:0018298    protein-chromophore linkage    The covalent or noncovalent attachment of a chromophore to a protein.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009523    photosystem II    A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain A   (PSAA_PEA | P05310)
molecular function
    GO:0051539    4 iron, 4 sulfur cluster binding    Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0016168    chlorophyll binding    Interacting selectively and non-covalently with chlorophyll; any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0018298    protein-chromophore linkage    The covalent or noncovalent attachment of a chromophore to a protein.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain B   (PSAB_PEA | P05311)
molecular function
    GO:0051539    4 iron, 4 sulfur cluster binding    Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0016168    chlorophyll binding    Interacting selectively and non-covalently with chlorophyll; any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0000287    magnesium ion binding    Interacting selectively and non-covalently with magnesium (Mg) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0018298    protein-chromophore linkage    The covalent or noncovalent attachment of a chromophore to a protein.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain C   (PSAC_PEA | P10793)
molecular function
    GO:0051539    4 iron, 4 sulfur cluster binding    Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0009773    photosynthetic electron transport in photosystem I    A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, X) through a chain of electron transport molecules in the thylakoid membrane until they reach ferredoxin which passes the electron to the ultimate electron acceptor; NADP.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.
    GO:0042651    thylakoid membrane    The pigmented membrane of any thylakoid.

Chain D   (PSAD_SPIOL | P12353)
molecular function
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009538    photosystem I reaction center    A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain E   (PSAE1_ARATH | Q9S831)
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
    GO:0009735    response to cytokinin    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009941    chloroplast envelope    The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.
    GO:0009534    chloroplast thylakoid    Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009538    photosystem I reaction center    A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0010287    plastoglobule    A lipoprotein particle present in chloroplasts. They are rich in non-polar lipids (triglycerides, esters) as well as in prenylquinones, plastoquinone and tocopherols. Plastoglobules are often associated with thylakoid membranes, suggesting an exchange of lipids with thylakoids.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain F   (PSAF_SPIOL | P12355)
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009543    chloroplast thylakoid lumen    The cavity enclosed within the chloroplast thylakoid membrane. An example of this component is found in Arabidopsis thaliana.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009538    photosystem I reaction center    A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain G   (PSAG_SPIOL | P12357)
molecular function
    GO:0016168    chlorophyll binding    Interacting selectively and non-covalently with chlorophyll; any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain H   (PSAH_SPIOL | P22179)
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009538    photosystem I reaction center    A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain I   (PSAI_PEA | P17227)
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain J   (PSAJ_SPIOL | P17230)
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain L   (PSAL_SPIOL | Q41385)
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009535    chloroplast thylakoid membrane    The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
    GO:0009538    photosystem I reaction center    A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
    GO:0009579    thylakoid    A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

Chain N   (Q84U30_PHAVU | Q84U30)
biological process
    GO:0015979    photosynthesis    The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
cellular component
    GO:0009522    photosystem I    A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).

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  Cis Peptide Bonds
    Ala 1:82 - Thr 1:83   [ RasMol ]  
    Ala 2:194 - His 2:195   [ RasMol ]  
    Ala 4:77 - Ala 4:78   [ RasMol ]  
    Ala 4:85 - Ser 4:86   [ RasMol ]  
    Ala A:35 - Lys A:36   [ RasMol ]  
    Ala A:489 - Gln A:490   [ RasMol ]  
    Ala A:81 - His A:82   [ RasMol ]  
    Ala F:37 - Pro F:38   [ RasMol ]  
    Ala G:32 - Lys G:33   [ RasMol ]  
    Ala G:82 - Tyr G:83   [ RasMol ]  
    Ala G:89 - Ser G:90   [ RasMol ]  
    Ala H:44 - Ala H:45   [ RasMol ]  
    Ala L:115 - Pro L:116   [ RasMol ]  
    Arg 1:10 - Pro 1:11   [ RasMol ]  
    Arg 1:38 - Tyr 1:39   [ RasMol ]  
    Arg D:102 - Val D:103   [ RasMol ]  
    Arg G:50 - Ala G:51   [ RasMol ]  
    Arg H:92 - Gly H:93   [ RasMol ]  
    Arg J:2 - Asp J:3   [ RasMol ]  
    Asn 1:188 - Ile 1:189   [ RasMol ]  
    Asn 1:87 - Pro 1:88   [ RasMol ]  
    Asn 2:191 - Leu 2:192   [ RasMol ]  
    Asn 3:212 - Leu 3:213   [ RasMol ]  
    Asn 4:116 - Gln 4:117   [ RasMol ]  
    Asp 1:183 - Pro 1:184   [ RasMol ]  
    Asp D:155 - Leu D:156   [ RasMol ]  
    Asp D:21 - Pro D:22   [ RasMol ]  
    Asp F:151 - Asn F:152   [ RasMol ]  
    Asp N:63 - Asp N:64   [ RasMol ]  
    Cys C:48 - Val C:49   [ RasMol ]  
    Cys N:77 - Gly N:78   [ RasMol ]  
    Gln 1:81 - Ala 1:82   [ RasMol ]  
    Gln A:483 - Leu A:484   [ RasMol ]  
    Gln A:490 - Trp A:491   [ RasMol ]  
    Gln B:71 - Gly B:72   [ RasMol ]  
    Gln H:74 - Asp H:75   [ RasMol ]  
    Glu A:32 - Gln A:33   [ RasMol ]  
    Glu D:19 - Leu D:20   [ RasMol ]  
    Glu H:41 - Thr H:42   [ RasMol ]  
    Glu N:36 - Phe N:37   [ RasMol ]  
    Glu N:44 - Asn N:45   [ RasMol ]  
    Glu N:70 - Gly N:71   [ RasMol ]  
    Gly 1:16 - Ser 1:17   [ RasMol ]  
    Gly 1:23 - Phe 1:24   [ RasMol ]  
    Gly 1:7 - Glu 1:8   [ RasMol ]  
    Gly 1:86 - Asn 1:87   [ RasMol ]  
    Gly 2:33 - Leu 2:34   [ RasMol ]  
    Gly 3:140 - Lys 3:141   [ RasMol ]  
    Gly 3:83 - Leu 3:84   [ RasMol ]  
    Gly D:150 - Lys D:151   [ RasMol ]  
    Gly F:4 - Leu F:5   [ RasMol ]  
    Gly F:57 - Lys F:58   [ RasMol ]  
    Gly H:25 - Ser H:26   [ RasMol ]  
    Gly H:90 - Pro H:91   [ RasMol ]  
    Gly H:93 - Lys H:94   [ RasMol ]  
    Gly N:38 - Ser N:39   [ RasMol ]  
    Gly N:48 - Cys N:49   [ RasMol ]  
    His B:83 - Val B:84   [ RasMol ]  
    His D:113 - Pro D:114   [ RasMol ]  
    Ile 1:189 - Gly 1:190   [ RasMol ]  
    Ile 2:189 - Asp 2:190   [ RasMol ]  
    Ile 3:78 - Leu 3:79   [ RasMol ]  
    Ile 4:120 - Phe 4:121   [ RasMol ]  
    Ile A:492 - Gln A:493   [ RasMol ]  
    Ile A:555 - Leu A:556   [ RasMol ]  
    Ile B:5 - Pro B:6   [ RasMol ]  
    Ile C:12 - Gly C:13   [ RasMol ]  
    Ile G:85 - Leu G:86   [ RasMol ]  
    Leu 1:181 - Ala 1:182   [ RasMol ]  
    Leu 1:27 - Gly 1:28   [ RasMol ]  
    Leu 2:114 - Asn 2:115   [ RasMol ]  
    Leu 2:19 - Asp 2:20   [ RasMol ]  
    Leu 2:192 - Phe 2:193   [ RasMol ]  
    Leu 2:32 - Gly 2:33   [ RasMol ]  
    Leu 3:217 - Ala 3:218   [ RasMol ]  
    Leu 3:55 - Ala 3:56   [ RasMol ]  
    Leu 3:84 - Ile 3:85   [ RasMol ]  
    Leu F:149 - Val F:150   [ RasMol ]  
    Leu L:118 - Thr L:119   [ RasMol ]  
    Leu N:61 - Ser N:62   [ RasMol ]  
    Lys 3:81 - Ala 3:82   [ RasMol ]  
    Lys G:33 - Gln G:34   [ RasMol ]  
    Lys J:5 - Thr J:6   [ RasMol ]  
    Lys N:54 - Gln N:55   [ RasMol ]  
    Lys N:74 - Tyr N:75   [ RasMol ]  
    Phe 1:22 - Gly 1:23   [ RasMol ]  
    Phe A:31 - Glu A:32   [ RasMol ]  
    Phe G:97 - Phe G:98   [ RasMol ]  
    Phe H:43 - Ala H:44   [ RasMol ]  
    Phe I:25 - Leu I:26   [ RasMol ]  
    Phe J:4 - Lys J:5   [ RasMol ]  
    Phe L:167 - Lys L:168   [ RasMol ]  
    Phe N:82 - Trp N:83   [ RasMol ]  
    Pro 1:118 - Glu 1:119   [ RasMol ]  
    Pro 1:19 - Gly 1:20   [ RasMol ]  
    Pro 2:145 - Leu 2:146   [ RasMol ]  
    Pro 2:153 - Gln 2:154   [ RasMol ]  
    Pro 3:209 - Tyr 3:210   [ RasMol ]  
    Pro 4:112 - Gly 4:113   [ RasMol ]  
    Pro B:310 - Pro B:311   [ RasMol ]  
    Pro D:105 - Ser D:106   [ RasMol ]  
    Pro D:72 - Asn D:73   [ RasMol ]  
    Pro H:73 - Gln H:74   [ RasMol ]  
    Pro H:91 - Arg H:92   [ RasMol ]  
    Pro L:112 - Ser L:113   [ RasMol ]  
    Pro N:43 - Glu N:44   [ RasMol ]  
    Ser 1:17 - Ala 1:18   [ RasMol ]  
    Ser 2:152 - Pro 2:153   [ RasMol ]  
    Ser 4:125 - Leu 4:126   [ RasMol ]  
    Ser A:80 - Ala A:81   [ RasMol ]  
    Ser C:4 - Val C:5   [ RasMol ]  
    Ser D:26 - Pro D:27   [ RasMol ]  
    Ser H:26 - Asp H:27   [ RasMol ]  
    Ser L:113 - Ile L:114   [ RasMol ]  
    Ser N:39 - Cys N:40   [ RasMol ]  
    Ser N:79 - Asn N:80   [ RasMol ]  
    Thr 2:186 - Gly 2:187   [ RasMol ]  
    Thr 2:93 - Leu 2:94   [ RasMol ]  
    Thr G:88 - Ala G:89   [ RasMol ]  
    Thr H:42 - Phe H:43   [ RasMol ]  
    Thr L:119 - Leu L:120   [ RasMol ]  
    Thr N:47 - Gly N:48   [ RasMol ]  
    Trp 1:68 - Val 1:69   [ RasMol ]  
    Trp 1:91 - Gly 1:92   [ RasMol ]  
    Trp 3:54 - Leu 3:55   [ RasMol ]  
    Trp A:491 - Ile A:492   [ RasMol ]  
    Trp B:70 - Gln B:71   [ RasMol ]  
    Trp E:45 - Phe E:46   [ RasMol ]  
    Tyr 1:84 - Leu 1:85   [ RasMol ]  
    Tyr 4:124 - Ser 4:125   [ RasMol ]  
    Tyr D:154 - Asp D:155   [ RasMol ]  
    Tyr G:83 - Tyr G:84   [ RasMol ]  
    Tyr H:24 - Gly H:25   [ RasMol ]  
    Tyr L:166 - Phe L:167   [ RasMol ]  
    Tyr L:79 - Ala L:80   [ RasMol ]  
    Val A:487 - Phe A:488   [ RasMol ]  
    Val D:109 - Gln D:110   [ RasMol ]  
    Val F:150 - Asp F:151   [ RasMol ]  
    Val N:2 - Ile N:3   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CAB6_ARATH | Q016671yo9 2wsc 2wse 2wsf 4xk8
        CB24_PEA | Q9SQL21yo9 2wsc 2wse 2wsf 3lw5 4rku 4xk8 4y28 5l8r
        PSAA_PEA | P053101yo9 2wsc 2wse 2wsf 3lw5 4rku 4xk8 4y28 5l8r
        PSAB_PEA | P053111yo9 2wsc 2wse 2wsf 3lw5 4rku 4xk8 4y28
        PSAC_PEA | P107931yo9 2wsc 2wse 2wsf 3lw5 4rku 4xk8 4y28 5l8r
        PSAD_SPIOL | P123532wsc 2wse 2wsf
        PSAE1_ARATH | Q9S8312wsc 2wse 2wsf
        PSAF_SPIOL | P123552wsc 2wse 2wsf 3lw5 4xk8
        PSAG_SPIOL | P123571yo9 2wsc 2wse 2wsf 4xk8
        PSAH_SPIOL | P221792wsc 2wse 2wsf
        PSAI_PEA | P172271yo9 2wsc 2wse 2wsf 3lw5 4rku 4xk8 4y28 5l8r
        PSAJ_SPIOL | P172302wsc 2wse 2wsf
        PSAL_SPIOL | Q413852wsc 2wse 2wsf
UniProtKB/TrEMBL
        Q41038_PEA | Q410382wsc 2wse 2wsf 3lw5 4rku 4xk8 4y28 5l8r
        Q84U30_PHAVU | Q84U302wsc 2wse 2wsf

(-) Related Entries Specified in the PDB File

1qzv PLANT PSI AT 4.4A RESOLUTIONS