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(-) Description

Title :  STRUCTURE OF ECDSBA-SULFONAMIDE1 COMPLEX
 
Authors :  M. L. Williams, B. C. Doak, M. Vazirani, O. Ilyichova, G. Wang, W. Bermel J. S. Simpson, D. K. Chalmers, G. F. King, M. Mobli, M. J. Scanlon
Date :  22 Aug 16  (Deposition) - 08 Feb 17  (Release) - 08 Feb 17  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
NMR Structure *:  A  (1x)
Keywords :  Oxidised Ecdsba, Sulfonamide, Oxidoreductases (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Mohanty, M. L. Williams, B. C. Doak, M. Vazirani, O. Ilyichova, G. Wang, W. Bermel, J. S. Simpson, D. K. Chalmers, G. F. King, M. Mobli, M. J. Scanlon
Determination Of Ligand Binding Modes In Weak Protein-Ligan Complexes Using Sparse Nmr Data.
J. Biomol. Nmr V. 66 195 2016
PubMed-ID: 27778134  |  Reference-DOI: 10.1007/S10858-016-0067-4

(-) Compounds

Molecule 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector: B0013-(5644BB)
    Gene: DSBA, DSF, PPFA, B3860, JW3832
    Organism Scientific: ESCHERICHIA COLI K-12
    Organism Taxid: 83333
    Strain: K12

 Structural Features

(-) Chains, Units

  1
NMR Structure (10x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1SFQ1Ligand/Ion2-{[(4-IODOPHENYL)SULFONYL]AMINO}BENZOIC ACID
NMR Structure * (1, 1)
No.NameCountTypeFull Name
1SFQ1Ligand/Ion2-{[(4-IODOPHENYL)SULFONYL]AMINO}BENZOIC ACID

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:32 , GLN A:35 , PHE A:36 , LEU A:40 , PRO A:163 , THR A:168 , MET A:171 , PHE A:174BINDING SITE FOR RESIDUE SFQ A 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2NDO)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2NDO)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2NDO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2NDO)

(-) Exons   (0, 0)

(no "Exon" information available for 2NDO)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:189
                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eee..........eeeee...hhhhhhhhh..hhhhhhhhhh.....eeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeee...eee.hhhh...hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ndo A   1 AQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALGVEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKK 189
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2NDO)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2NDO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2NDO)

(-) Gene Ontology  (8, 8)

NMR Structure(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DSBA_ECOLI | P0AEG4: 1a23 1a24 1a2j 1a2l 1a2m 1ac1 1acv 1bq7 1dsb 1fvj 1fvk 1ti1 1u3a 1un2 2b3s 2b6m 2hi7 2leg 2zup 3e9j 4tky 4zij

(-) Related Entries Specified in the PDB File

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