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(-) Description

Title :  TRANSMEMBRANE DOMAIN OF MOUSE FAS/CD95 DEATH RECEPTOR
 
Authors :  Q. Fu, J. J. Chou, H. Wu, T. Fu, Membrane Protein Structures By Solut (Mpsbynmr)
Date :  21 Dec 15  (Deposition) - 27 Jan 16  (Release) - 02 Mar 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B,C  (15x)
NMR Structure *:  A,B,C  (1x)
Keywords :  Transmembrane Helix Trimer, Transmembrane Domain, Proline-Based Motif, Apoptosis (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Q. Fu, T. M. Fu, A. C. Cruz, P. Sengupta, S. K. Thomas, S. Wang, R. M. Siegel, H. Wu, J. J. Chou
Structural Basis And Functional Role Of Intramembrane Trimerization Of The Fas/Cd95 Death Receptor.
Mol. Cell V. 61 602 2016
PubMed-ID: 26853147  |  Reference-DOI: 10.1016/J.MOLCEL.2016.01.009

(-) Compounds

Molecule 1 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 6
    Chains: A, B, C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Expression System Vector: PMM-LR6
    Fragment: HELICAL TRANSMEMBRANE RESIDUES 167-193
    Gene: FAS, APT1, TNFRSF6
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: APO-1 ANTIGEN, APOPTOSIS-MEDIATING SURFACE ANTIGEN FAS, FASLG RECEPTOR

 Structural Features

(-) Chains, Units

  123
NMR Structure (15x): ABC
NMR Structure * (1x): ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2NA6)

(-) Sites  (0, 0)

(no "Site" information available for 2NA6)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2NA6)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2NA6)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2NA6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2NA6)

(-) Exons   (0, 0)

(no "Exon" information available for 2NA6)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:28
                                                            
               SCOP domains ---------------------------- SCOP domains
               CATH domains ---------------------------- CATH domains
               Pfam domains ---------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------- SAPs(SNPs)
                    PROSITE ---------------------------- PROSITE
                 Transcript ---------------------------- Transcript
                 2na6 A 167 RNRLWLLTILVLLIPLVFIYRKYRKRKS 194
                                   176       186        


Chain B from PDB  Type:PROTEIN  Length:28
                                                            
               SCOP domains ---------------------------- SCOP domains
               CATH domains ---------------------------- CATH domains
               Pfam domains ---------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh.hhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------- SAPs(SNPs)
                    PROSITE ---------------------------- PROSITE
                 Transcript ---------------------------- Transcript
                 2na6 B 167 RNRLWLLTILVLLIPLVFIYRKYRKRKS 194
                                   176       186        


Chain C from PDB  Type:PROTEIN  Length:28
                                                            
               SCOP domains ---------------------------- SCOP domains
               CATH domains ---------------------------- CATH domains
               Pfam domains ---------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------- SAPs(SNPs)
                    PROSITE ---------------------------- PROSITE
                 Transcript ---------------------------- Transcript
                 2na6 C 167 RNRLWLLTILVLLIPLVFIYRKYRKRKS 194
                                   176       186
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2NA6)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2NA6)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2NA6)

(-) Gene Ontology  (106, 106)

NMR Structure(hide GO term definitions)

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(no "Cis Peptide Bonds" information available for 2na6)
 

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  TNR6_MOUSE | P25446
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TNR6_MOUSE | P25446: 3oq9

(-) Related Entries Specified in the PDB File

2na7 RELATED ID: 25929 RELATED DB: BMRB