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(-) Description

Title :  SOLUTION STRUCTURE OF THE RNEDD4 WW2 DOMAIN-CX43CT PEPTIDE COMPLEX BY NMR
 
Authors :  G. Spagnol, F. Kieken, P. L. Sorgen
Date :  27 Oct 15  (Deposition) - 24 Feb 16  (Release) - 22 Mar 17  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (10x)
NMR Structure *:  A,B  (1x)
Keywords :  Rnedd4 Ww2, Cx43Ct, Phosphorylation, Ligase, Ligase-Peptide Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Spagnol, F. Kieken, J. L. Kopanic, H. Li, S. Zach, K. L. Stauch, R. Grosely, P. L. Sorgen
Structural Studies Of The Nedd4 Ww Domains And Their Selectivity For The Connexin43 (Cx43) Carboxyl Terminus.
J. Biol. Chem. V. 291 7637 2016
PubMed-ID: 26841867  |  Reference-DOI: 10.1074/JBC.M115.701417

(-) Compounds

Molecule 1 - E3 UBIQUITIN-PROTEIN LIGASE NEDD4
    Chains: A
    EC Number: 6.3.2.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PGEX-KT
    Fragment: WW2 DOMAIN
    Gene: NEDD4, NEDD4A
    Organism Common: BROWN RAT,RAT,RATS
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
 
Molecule 2 - CX43CT PEPTIDE
    Chains: B
    Engineered: YES
    Other Details: CHEMICALLY SYNTHESIZED, PURCHASED FROM A VENDOR
    Synonym: CONNEXIN-43, CX43, GAP JUNCTION 43 KDA HEART PROTEIN
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
NMR Structure (10x): AB
NMR Structure * (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

NMR Structure (1, 2)
No.NameCountTypeFull Name
1SEP2Mod. Amino AcidPHOSPHOSERINE
NMR Structure * (1, 2)
No.NameCountTypeFull Name
1SEP2Mod. Amino AcidPHOSPHOSERINE

(-) Sites  (0, 0)

(no "Site" information available for 2N8T)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2N8T)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2N8T)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N8T)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2N8T)

(-) Exons   (0, 0)

(no "Exon" information available for 2N8T)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:39
                                                                      
               SCOP domains --------------------------------------- SCOP domains
               CATH domains --------------------------------------- CATH domains
               Pfam domains --------------------------------------- Pfam domains
         Sec.struct. author .........eeeee.....eeeee....ee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------- PROSITE
                 Transcript --------------------------------------- Transcript
                  2n8t A  1 GSSSGLPPGWEEKQDDRGRSYYVDHNSKTTTWSKPTMQD 39
                                    10        20        30         


Chain B from PDB  Type:PROTEIN  Length:14
                                             
               SCOP domains -------------- SCOP domains
               CATH domains -------------- CATH domains
               Pfam domains -------------- Pfam domains
         Sec.struct. author .............. Sec.struct. author
                 SAPs(SNPs) -------------- SAPs(SNPs)
                    PROSITE -------------- PROSITE
                 Transcript -------------- Transcript
                  2n8t B 40 APLsPMsPPGYKLV 53
                               |  | 49    
                              43-SEP      
                                 46-SEP
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N8T)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2N8T)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2N8T)

(-) Gene Ontology  (119, 124)

NMR Structure(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CXA1_RAT | P08050: 1r5s 3cyy
        NEDD4_RAT | Q62940: 1i5h 2n8s 2n8u

(-) Related Entries Specified in the PDB File

2n8s 2n8u