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(-) Description

Title :  TOM1 NEGATIVELY MODULATES BINDING OF TOLLIP TO PHOSPHATIDYLINOSITOL 3-PHOSPHATE VIA A COUPLED FOLDING AND BINDING MECHANISM
 
Authors :  S. Xiao, G. Armstrong, D. Capelluto
Date :  11 May 15  (Deposition) - 16 Sep 15  (Release) - 21 Oct 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Xiao, M. K. Brannon, X. Zhao, K. I. Fread, J. F. Ellena, J. H. Bushweller, C. V. Finkielstein, G. S. Armstrong, D. G. Capelluto
Tom1 Modulates Binding Of Tollip To Phosphatidylinositol 3-Phosphate Via A Coupled Folding And Binding Mechanism.
Structure V. 23 1910 2015
PubMed-ID: 26320582  |  Reference-DOI: 10.1016/J.STR.2015.07.017

(-) Compounds

Molecule 1 - TARGET OF MYB PROTEIN 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PGEX-6P-1
    Fragment: GAT DOMAIN RESIDUES 215-309
    Gene: TOM1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: VPG

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2N2N)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2N2N)

(-) Cis Peptide Bonds  (1, 1)

NMR Structure
No.Residues
1Asn A:277 -Glu A:278

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2N2N)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:95
                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------- Transcript
                 2n2n A 215 EQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQLTEELLIVNDNLNNVFLRHERFERFRTGQT 309
                                   224       234       244       254       264       274       284       294       304
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2N2N)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (14, 14)

NMR Structure(hide GO term definitions)

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  Cis Peptide Bonds
    Asn A:277 - Glu A:278   [ RasMol ]  
 

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  2n2n
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  TOM1_HUMAN | O60784
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TOM1_HUMAN | O60784: 1elk 1wrd 2n9d

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2N2N)