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(-) Description

Title :  METAL BINDING OF GLUTAREDOXINS
 
Authors :  S. M. Bilinovich, J. A. Caporoso, A. Taraboletti, N. Duangjumpa, M. J. P J. W. Prokop, L. P. Shriver, T. C. Leeper
Date :  11 Feb 15  (Deposition) - 13 Apr 16  (Release) - 13 Apr 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (15x)
NMR Structure *:  A,B  (1x)
Keywords :  Glutaredoxin, Silver, Dimer, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. M. Bilinovich, J. A. Caporoso, A. Taraboletti, N. Duangjumpa, M. J. Panzner, J. W. Prokop, L. P. Shriver, T. C. Leeper
Metal Binding Of Glutaredoxins
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - GLUTAREDOXIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PAVA
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 5-92
    Gene: BMEI0184
    Mutation: YES
    Organism Scientific: BRUCELLA MELITENSIS
    Organism Taxid: 224914
    Strain: 16M / ATCC 23456 / NCTC 10094

 Structural Features

(-) Chains, Units

  12
NMR Structure (15x): AB
NMR Structure * (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
1AG1Ligand/IonSILVER ION
NMR Structure * (0, 0)
No.NameCountTypeFull Name
1AG-1Ligand/IonSILVER ION

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:15 , CYS A:16 , GLY B:15 , CYS B:16BINDING SITE FOR RESIDUE AG B 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2MZC)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2MZC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2MZC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2MZC)

(-) Exons   (0, 0)

(no "Exon" information available for 2MZC)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:92
 aligned with Q8YJA2_BRUME | Q8YJA2 from UniProtKB/TrEMBL  Length:92

    Alignment length:92
                                    10        20        30        40        50        60        70        80        90  
          Q8YJA2_BRUME    1 MEFLMVDVIIYTRPGCPYCARAKALLARKGAEFNEIDASATPELRAEMQERSGRNTFPQIFIGSVHVGGCDDLYALEDEGKLDSLLKTGKLI 92
               SCOP domains -------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeee.......hhhhhhhhhhh...........hhhhhhhhhhh.......eeee..eee.hhhhhhhhhhhh.hhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                  2mzc A  1 GPGSMVDVIIYTRPGCPYCARAKALLARKGAEFNEIDASATPELRAEMQERSGRNTFPQIFIGSVHVGGSDDLYALEDEGKLDSLLKTGKLI 92
                                    10        20        30        40        50        60        70        80        90  


Chain B from PDB  Type:PROTEIN  Length:92
 aligned with Q8YJA2_BRUME | Q8YJA2 from UniProtKB/TrEMBL  Length:92

    Alignment length:92
                                    10        20        30        40        50        60        70        80        90  
          Q8YJA2_BRUME    1 MEFLMVDVIIYTRPGCPYCARAKALLARKGAEFNEIDASATPELRAEMQERSGRNTFPQIFIGSVHVGGCDDLYALEDEGKLDSLLKTGKLI 92
               SCOP domains -------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeee.......hhhhhhhhhhh...........hhhhhhhhhhh.......eeee..eee.hhhhhhhhhhhh.hhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                  2mzc B  1 GPGSMVDVIIYTRPGCPYCARAKALLARKGAEFNEIDASATPELRAEMQERSGRNTFPQIFIGSVHVGGSDDLYALEDEGKLDSLLKTGKLI 92
                                    10        20        30        40        50        60        70        80        90
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2MZC)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2MZC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2MZC)

(-) Gene Ontology  (5, 5)

NMR Structure(hide GO term definitions)
Chain A,B   (Q8YJA2_BRUME | Q8YJA2)
molecular function
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0015035    protein disulfide oxidoreductase activity    Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
biological process
    GO:0045454    cell redox homeostasis    Any process that maintains the redox environment of a cell or compartment within a cell.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005623    cell    The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

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  2mzc
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8YJA2_BRUME | Q8YJA2: 2khp

(-) Related Entries Specified in the PDB File

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