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(-) Description

Title :  SOLUTION STRUCTURE OF HNRNP C RRM IN COMPLEX WITH 5'-UUUUC-3' RNA
 
Authors :  Z. Cienikova, F. F. Damberger, J. Hall, F. H. -T. Allain, C. Maris
Date :  05 Feb 15  (Deposition) - 08 Apr 15  (Release) - 08 Apr 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (20x)
NMR Structure *:  A,B  (1x)
Keywords :  Hnrnp C, Rrm, Complex, Rna Binding Protein-Rna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Z. Cienikova, F. F. Damberger, J. Hall, F. H. Allain, C. Maris
Structural And Mechanistic Insights Into Poly(Uridine) Trac Recognition By The Hnrnp C Rna Recognition Motif.
J. Am. Chem. Soc. V. 136 14536 2014
PubMed-ID: 25216038  |  Reference-DOI: 10.1021/JA507690D

(-) Compounds

Molecule 1 - HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINS C1/C2
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PTYB11
    Expression System Strain: CODON+
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: RRM (UNP RESIDUES 2-106)
    Gene: HNRNPC, HNRPC
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: HNRNP C1/C2, HNRNP C
 
Molecule 2 - 5'-R(*UP*UP*UP*UP*C)-3'
    Chains: B
    Engineered: YES
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
NMR Structure (20x): AB
NMR Structure * (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2MZ1)

(-) Sites  (0, 0)

(no "Site" information available for 2MZ1)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2MZ1)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2MZ1)

(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RRMPS50102 Eukaryotic RNA Recognition Motif (RRM) profile.HNRPC_HUMAN16-87  1A:16-87
NMR Structure * (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1RRMPS50102 Eukaryotic RNA Recognition Motif (RRM) profile.HNRPC_HUMAN16-87  1A:16-87

(-) Exons   (0, 0)

(no "Exon" information available for 2MZ1)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............eeeee..........hhhhhh.....eeeeee....eeeee.hhhhhhhhhhhhh..ee..ee.eeee...................... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 2mz1 A   2 ASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYG 106
                                    11        21        31        41        51        61        71        81        91       101     


Chain B from PDB  Type:RNA  Length:5
                                     
                 2mz1 B   1 UUUUC   5
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2MZ1)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2MZ1)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2MZ1)

(-) Gene Ontology  (34, 34)

NMR Structure(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HNRPC_HUMAN | P07910: 1txp 1wf2 2mxy 3ln4

(-) Related Entries Specified in the PDB File

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