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(-) Description

Title :  NOE-BASED MODEL OF THE INFLUENZA A VIRUS M2 (19-49) BOUND TO DRUG 11
 
Authors :  Y. Wu, J. Wang, W. Degrado
Date :  18 Sep 14  (Deposition) - 24 Dec 14  (Release) - 14 Jan 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B,C,D  (20x)
NMR Structure *:  A,B,C,D  (1x)
Keywords :  Drug Design, M2, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Wu, B. Canturk, H. Jo, C. Ma, E. Gianti, M. L. Klein, L. H. Pinto, R. A. Lamb, G. Fiorin, J. Wang, W. F. Degrado
Flipping In The Pore: Discovery Of Dual Inhibitors That Bin In Different Orientations To The Wild-Type Versus The Amantadine-Resistant S31N Mutant Of The Influenza A Virus M Proton Channel.
J. Am. Chem. Soc. V. 136 17987 2014
PubMed-ID: 25470189  |  Reference-DOI: 10.1021/JA508461M

(-) Compounds

Molecule 1 - MATRIX PROTEIN 2
    Chains: A, B, C, D
    Engineered: YES
    Fragment: UNP RESIDUES 19-49
    Organism Scientific: INFLUENZA A VIRUS
    Organism Taxid: 499433
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1234
NMR Structure (20x): ABCD
NMR Structure * (1x): ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

NMR Structure (1, 1)
No.NameCountTypeFull Name
13LW1Ligand/Ion(3S,5S,7S)-N-[(5-BROMOTHIOPHEN-2-YL)METHYL]TRICYCLO[3.3.1.1~3,7~]DECAN-1-AMINIUM
NMR Structure * (1, 1)
No.NameCountTypeFull Name
13LW1Ligand/Ion(3S,5S,7S)-N-[(5-BROMOTHIOPHEN-2-YL)METHYL]TRICYCLO[3.3.1.1~3,7~]DECAN-1-AMINIUM

(-) Sites  (1, 1)

NMR Structure (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL C:27 , ALA C:30 , VAL D:27BINDING SITE FOR RESIDUE 3LW C 100

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2MUV)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2MUV)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2MUV)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2MUV)

(-) Exons   (0, 0)

(no "Exon" information available for 2MUV)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  2muv A 19 SNDSSDPLVVAANIIGILHLILWILDRLFFK 49
                                    28        38        48 


Chain B from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  2muv B 19 SNDSSDPLVVAANIIGILHLILWILDRLFFK 49
                                    28        38        48 


Chain C from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  2muv C 19 SNDSSDPLVVAANIIGILHLILWILDRLFFK 49
                                    28        38        48 


Chain D from PDB  Type:PROTEIN  Length:31
                                                              
               SCOP domains ------------------------------- SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                  2muv D 19 SNDSSDPLVVAANIIGILHLILWILDRLFFK 49
                                    28        38        48
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2MUV)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2MUV)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2MUV)

(-) Gene Ontology  (13, 13)

NMR Structure(hide GO term definitions)

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(-) Related Entries Specified in the PDB File

2muw