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(-) Description

Title :  BACKBONE 1H, 13C, AND 15N CHEMICAL SHIFT ASSIGNMENTS FOR COLD SHOCK PROTEIN, TACSP
 
Authors :  B. Jin, K. W. Jeong, Y. Kim
Date :  17 Apr 14  (Deposition) - 20 Aug 14  (Release) - 20 Aug 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Cold Shock Protein, Thermus Aquaticus, Protein Binding, Protien Stability, Dna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Jin, K. W. Jeong, Y. Kim
Structure And Flexibility Of The Thermophilic Cold-Shock Protein Of Thermus Aquaticus
Biochem. Biophys. Res. Commun. 2014
PubMed-ID: 25101648  |  Reference-DOI: 10.1016/J.BBRC.2014.07.127

(-) Compounds

Molecule 1 - COLD-SHOCK DNA-BINDING DOMAIN PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET11-A
    Expression System Vector Type: VECTOR
    Gene: TAQDRAFT_4615
    Organism Scientific: THERMUS AQUATICUS
    Organism Taxid: 498848
    Strain: Y51MC23

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:68
 aligned with B7ABH3_THEAQ | B7ABH3 from UniProtKB/TrEMBL  Length:68

    Alignment length:68
                                    10        20        30        40        50        60        
          B7ABH3_THEAQ    1 MKKGTVKWFNAEKGYGFIQQEEGPDVFVHFTAIEADGFRTLNEGEHVEFEVEPGRGGKGPQAKKVRRI 68
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee....eeee.........ee................eeeeeee........eeeeeeee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  2mo0 A  1 MKKGTVKWFNAEKGYGFIQQEEGPDVFVHFTAIEADGFRTLNEGEHVEFEVEPGRGGKGPQAKKVRRI 68
                                    10        20        30        40        50        60
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(-) Gene Ontology  (5, 5)

NMR Structure(hide GO term definitions)
Chain A   (B7ABH3_THEAQ | B7ABH3)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
    GO:0003676    nucleic acid binding    Interacting selectively and non-covalently with any nucleic acid.
biological process
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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 Related Entries

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        B7ABH3_THEAQ | B7ABH3: 2mo1

(-) Related Entries Specified in the PDB File

2mo1