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(-) Description

Title :  SOLUTION NMR STRUCTURE OF THE REOVIRUS P15 FUSION-ASSOCIATED SMALL TRANSMEMBRANE (FAST) PROTEIN FUSION-INDUCING LIPID PACKING SENSOR (FLIPS) MOTIF IN DODECYL PHOSPHOCHOLINE (DPC) MICELLES
 
Authors :  M. Sarker, R. Duncan, J. Read, J. Rainey
Date :  09 Apr 14  (Deposition) - 23 Apr 14  (Release) - 23 Apr 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (50x)
NMR Structure *:  A  (1x)
Keywords :  P15 Flips, Fast Protein, Fusion Protein, Reovirus, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Read, E. Clancy, M. Sarker, D. Langelaan, J. Rainey, R. Duncan
Novel Helix-Loop-Helix Fusion-Inducing Lipid Packing Sensor (Flips) For Cell-Cell Fusion
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MEMBRANE FUSION PROTEIN P15
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 68-87
    Organism Scientific: BABOON ORTHOREOVIRUS
    Organism Taxid: 75888

 Structural Features

(-) Chains, Units

  1
NMR Structure (50x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

NMR Structure (2, 2)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2NH21Mod. Amino AcidAMINO GROUP
NMR Structure * (2, 2)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2NH21Mod. Amino AcidAMINO GROUP

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2MNS)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2MNS)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2MNS)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:22
 aligned with Q918V6_9REOV | Q918V6 from UniProtKB/TrEMBL  Length:140

    Alignment length:22
                                    76        86  
          Q918V6_9REOV   67 ELGLLSYGAGVASLPLLNVIAH 88
               SCOP domains ---------------------- SCOP domains
               CATH domains ---------------------- CATH domains
               Pfam domains ---------------------- Pfam domains
         Sec.struct. author ...hhhhhh....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------- SAPs(SNPs)
                    PROSITE ---------------------- PROSITE
                 Transcript ---------------------- Transcript
                  2mns A  0 xLGLLSYGAGVASLPLLNVIAx 21
                            |        9        19 |
                            |                   21-NH2
                            0-ACE
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2MNS)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2MNS)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2MNS)

(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A   (Q918V6_9REOV | Q918V6)
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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  2mns
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q918V6_9REOV | Q918V6: 2lkw

(-) Related Entries Specified in the PDB File

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