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(-) Description

Title :  HYBRID STRUCTURE OF THE SHIGELLA FLEXNERI MXIH TYPE THREE SECRETION SYSTEM NEEDLE
 
Authors :  J. P. Demers, B. Habenstein, A. Loquet, S. K. Vasa, S. Becker, D. Baker, A N. G. Sgourakis
Date :  14 Mar 14  (Deposition) - 08 Oct 14  (Release) - 08 Oct 14  (Revision)
Method :  SOLID-STATE NMR; ELECTRON MICROSCOPY
Resolution :  7.70
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,a,b,c  (10x)
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,a,b,c  (1x)
Keywords :  Type-Three Secretion System, Filamentous Protein, Helical Assembly, Shigella Flexneri, Protein Translocation, Hybrid Methods, Rosetta, Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. P. Demers, B. Habenstein, A. Loquet, S. Kumar Vasa, K. Giller, S. Becker, D. Baker, A. Lange, N. G. Sgourakis
High-Resolution Structure Of The Shigella Type-Iii Secretio Needle By Solid-State Nmr And Cryo-Electron Microscopy.
Nat Commun V. 5 4976 2014
PubMed-ID: 25264107  |  Reference-DOI: 10.1038/NCOMMS5976

(-) Compounds

Molecule 1 - MXIH
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET16B
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MXIH
    Organism Scientific: SHIGELLA FLEXNERI
    Organism Taxid: 623
    Strain: SEROTYPE 6, BC-114

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920212223242526272829
Asymmetric Unit (10x): ABCDEFGHIJKLMNOPQRSTUVWXYZabc
Biological Unit 1 (1x): ABCDEFGHIJKLMNOPQRSTUVWXYZabc

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2MME)

(-) Sites  (0, 0)

(no "Site" information available for 2MME)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2MME)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2MME)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2MME)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2MME)

(-) Exons   (0, 0)

(no "Exon" information available for 2MME)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme A  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain B from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme B  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain C from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme C  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain D from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme D  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain E from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme E  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain F from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme F  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain G from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme G  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain H from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme H  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain I from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme I  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain J from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme J  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain K from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme K  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain L from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme L  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain M from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme M  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain N from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme N  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain O from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme O  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain P from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme P  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain Q from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme Q  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain R from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme R  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain S from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme S  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain T from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme T  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain U from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme U  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain V from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme V  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain W from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme W  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain X from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme X  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain Y from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme Y  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain Z from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme Z  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain a from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme a  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain b from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme b  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80   


Chain c from PDB  Type:PROTEIN  Length:83
 aligned with Q6XVY0_SHIFL | Q6XVY0 from UniProtKB/TrEMBL  Length:83

    Alignment length:83
                                    10        20        30        40        50        60        70        80   
          Q6XVY0_SHIFL    1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                  2mme c  1 MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR 83
                                    10        20        30        40        50        60        70        80
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2MME)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2MME)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2MME)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,a,b,c   (Q6XVY0_SHIFL | Q6XVY0)
molecular function
    GO:0008565    protein transporter activity    Enables the directed movement of proteins into, out of or within a cell, or between cells.
biological process
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
    GO:0015031    protein transport    The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

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 Related Entries

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