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(-) Description

Title :  NON-REDUCIBLE ANALOGUES OF ALPHA-CONOTOXIN VC1.1: [2,8]-TRANS DICARBA VC1.1
 
Authors :  S. D. Robinson, C. A. Macraild, B. J. Van Lierop, A. J. Robinson, R. S. No
Date :  24 Oct 13  (Deposition) - 18 Dec 13  (Release) - 18 Dec 13  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Dicarba, Toxin (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  B. J. Van Lierop, S. D. Robinson, S. N. Kompella, A. Belgi, J. R. Mcarthur, A. Hung, C. A. Macraild, D. J. Adams, R. S. Norton, A. J. Robinson
Dicarba Alpha-Conotoxin Vc1. 1 Analogues With Differential Selectivity For Nicotinic Acetylcholine And Gabab Receptors
Acs Chem. Biol. V. 8 1815 2013
PubMed-ID: 23768016  |  Reference-DOI: 10.1021/CB4002393

(-) Compounds

Molecule 1 - ALPHA-CONOTOXIN VC1A
    ChainsA
    EngineeredYES
    Organism CommonQUEEN VICTORIA CONE SNAIL
    Organism ScientificCONUS VICTORIAE
    Organism Taxid319920
    Other DetailsVENOM
    SynonymACV1, ALPHA-VC1A, VC1.1
    SyntheticYES

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

NMR Structure (2, 3)
No.NameCountTypeFull Name
1ABA2Mod. Amino AcidALPHA-AMINOBUTYRIC ACID
2NH21Mod. Amino AcidAMINO GROUP
NMR Structure * (2, 3)
No.NameCountTypeFull Name
1ABA2Mod. Amino AcidALPHA-AMINOBUTYRIC ACID
2NH21Mod. Amino AcidAMINO GROUP

(-) Sites  (0, 0)

(no "Site" information available for 2MFY)

(-) SS Bonds  (1, 1)

NMR Structure
No.Residues
1A:3 -A:16

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2MFY)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2MFY)

(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ALPHA_CONOTOXINPS60014 Alpha-conotoxin family signature.CA1A_CONVC51-65  1A:3-16
NMR Structure * (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ALPHA_CONOTOXINPS60014 Alpha-conotoxin family signature.CA1A_CONVC51-65  1A:3-16

(-) Exons   (0, 0)

(no "Exon" information available for 2MFY)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:17
 aligned with CA1A_CONVC | P69747 from UniProtKB/Swiss-Prot  Length:66

    Alignment length:17
                                    59       
            CA1A_CONVC   50 GCCSDPRCNYDHPEICG 66
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author hhhhh............ Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE -ALPHA_CONOTOXIN- PROSITE
                 Transcript ----------------- Transcript
                  2mfy A  1 GaCSDPRaNYDHPEICx 17
                             |     |10      |
                             |     8-ABA   17-NH2
                             2-ABA           

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2MFY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2MFY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2MFY)

(-) Gene Ontology  (5, 5)

NMR Structure(hide GO term definitions)
Chain A   (CA1A_CONVC | P69747)
molecular function
    GO:0030550    acetylcholine receptor inhibitor activity    Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is decreased.
biological process
    GO:2000272    negative regulation of receptor activity    Any process that stops, prevents or reduces the frequency, rate or extent of receptor activity.
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0035792    other organism postsynaptic membrane    A postsynaptic membrane that is part of another organism, i.e. a secondary organism with which the first organism is interacting. A postsynaptic membrane is a specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters transmit the signal across the synaptic cleft to the postsynaptic membrane.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CA1A_CONVC | P697472h8s 2mfx 2mg6 2n07 4ttl

(-) Related Entries Specified in the PDB File

2mfx 2mg6