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(-) Description

Title :  MANNOTRIOSE COMPLEX OF THERMOMONOSPORA FUSCA BETA-MANNANASE
 
Authors :  M. Hilge, S. M. Gloor, K. Piontek
Date :  12 Aug 98  (Deposition) - 13 Aug 99  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Mannanase, Glycosyl Hydrolase, Family 5, Thermomonospora Fusca (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Hilge, S. M. Gloor, W. Rypniewski, O. Sauer, T. D. Heightman, W. Zimmermann, K. Winterhalter, K. Piontek
High-Resolution Native And Complex Structures Of Thermostable Beta-Mannanase From Thermomonospora Fusca - Substrate Specificity In Glycosyl Hydrolase Family 5.
Structure V. 6 1433 1998
PubMed-ID: 9817845  |  Reference-DOI: 10.1016/S0969-2126(98)00142-7
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PROTEIN (BETA-MANNANASE)
    Chains: A
    EC Number: 3.2.1.78
    Organism Scientific: THERMOBIFIDA FUSCA
    Organism Taxid: 2021
    Other Details: MANNOTRIOSE COMPLEX
    Other Details - Source: GERMAN COLLECTION OF MICROORGANISMS (DSM)
    Strain: KW3

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1BMA1Ligand/IonBETA-D-MANNOSE
2MAN1Ligand/IonALPHA-D-MANNOSE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP A:30 , TYR A:31 , TRP A:59 , GLY A:258 , MAN A:403 , HOH A:529BINDING SITE FOR RESIDUE BMA A 402
2AC2SOFTWARETRP A:30 , HIS A:86 , TRP A:254 , ASN A:259 , GLY A:260 , VAL A:263 , BMA A:402 , HOH A:427 , HOH A:565BINDING SITE FOR RESIDUE MAN A 403

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:74 -A:81

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Trp A:254 -Ser A:255

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2MAN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2MAN)

(-) Exons   (0, 0)

(no "Exon" information available for 2MAN)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:298
 aligned with Q9ZF13_THEFU | Q9ZF13 from UniProtKB/TrEMBL  Length:279

    Alignment length:302
                              1                                                                                                                                                                                                                                                                                   279                     
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278|        -         -  
         Q9ZF13_THEFU     - --GLHVKNGRLYEANGQEFIIRGVSHPHNWYPQHTQAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQSGASTLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAGAWDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTGNTVFSIHMYGVYSQASTITSYLEHFVNAGLPLIIGEFGHDHSDGNPDEDTIMAEAERLKLGYIGWSWSGNGGGVEYLDMVYNFDGDNLSPWG---------------------   -
               SCOP domains d2mana_ A: Beta-mannanase                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains 2manA00 A:1-302 Glycosidases                                                                                                                                                                                                                                                                                   CATH domains
               Pfam domains -----------Cellulase-2manA01 A:12-260                                                                                                                                                                                                                               ------------------------------------------ Pfam domains
         Sec.struct. author ....eee..eee.........eeeee........hhhhhhhhhh...eeeeee..........hhhhhhhhhhhhh...eeeeeehhh...........hhhhhhhhhh.hhhh......eeee.........hhhhhhhhhhhhhhhhhhhh......eeee..........hhhhhhhhhhhh.....eeeeeee.hhh..hhhhhhhhhhhhhh...eeeeee...----...hhhhhhhhhhh...eee..........hhh...hhh......hhhhhhhh....hhhh........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2man A   1 ATGLHVKNGRLYEANGQEFIIRGVSHPHNWYPQHTQAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQSGASTLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTGNTVFSIHMYGVYSQASTITSYLEHFVNAGLPLIIGEFGHD----NPDEDTIMAEAERLKLGYIGWSWSGNGGGVEYLDMVYNFDGDNLSPWGERIFYGPNGIASTAKEAVIFG 302
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220        |-   |   240       250       260       270       280       290       300  
                                                                                                                                                                                                                                                              229  234
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: Glyco_hydro_tim (488)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q9ZF13_THEFU | Q9ZF13)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
    GO:0016985    mannan endo-1,4-beta-mannosidase activity    Catalysis of the random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans, glucomannans, and galactoglucomannans.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

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  2man
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9ZF13_THEFU | Q9ZF13: 1bqc 3man

(-) Related Entries Specified in the PDB File

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