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(-) Description

Title :  SOLUTION NMR STRUCTURE OF SALMONELLA TYPHIMURIUM LT2 SECRETED PROTEIN SRFN: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET STR109
 
Authors :  J. R. Cort, A. Eletsky, J. N. Adkins, M. C. Burnet, D. Parish, K. Liu, D. K. Sukumaran, M. Jiang, K. Cunningham, T. Ma, R. Xiao, B. Rost, G. T. Montelione, T. Szyperski, Northeast Structural Genomics Co (Nesg)
Date :  29 Jun 13  (Deposition) - 04 Sep 13  (Release) - 30 Jul 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (20x)
NMR Structure *:  A,B  (1x)
Keywords :  Homodimer, Psi-Biology, Alpha+Beta, Secreted Protein, Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Eletsky, K. Michalska, S. Houliston, Q. Zhang, M. D. Daily, X. Xu, H. Cui, A. Yee, A. Lemak, B. Wu, M. Garcia, M. C. Burnet, K. M. Meyer, U. K. Aryal, O. Sanchez, C. Ansong, R. Xiao, T. B. Acton, J. N. Adkins, G. T. Montelione, A. Joachimiak, C. H. Arrowsmith, A. Savchenko, T. Szyperski, J. R. Cort
Structural And Functional Characterization Of Duf1471 Domains Of Salmonella Proteins Srfn, Ydgh/Sssb, And Yaho.
Plos One V. 9 01787 2014
PubMed-ID: 25010333  |  Reference-DOI: 10.1371/JOURNAL.PONE.0101787

(-) Compounds

Molecule 1 - PUTATIVE SECRETED PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Strain: BL21(DE3)+ MAGIC
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: STM0082
    Organism Common: SALMONELLA TYPHIMURIUM
    Organism Scientific: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM
    Organism Taxid: 99287
    Strain: LT2

 Structural Features

(-) Chains, Units

  12
NMR Structure (20x): AB
NMR Structure * (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2MA8)

(-) Sites  (0, 0)

(no "Site" information available for 2MA8)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2MA8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2MA8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2MA8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2MA8)

(-) Exons   (0, 0)

(no "Exon" information available for 2MA8)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:83
 aligned with Q7CR88_SALTY | Q7CR88 from UniProtKB/TrEMBL  Length:96

    Alignment length:83
                                                                                                     96        
                                    31        41        51        61        71        81        91    |    -   
         Q7CR88_SALTY    22 AEQVSKQEISHFKLVKVGTINVSQSGGQISSPSDLREKLSELADAKGGKYYHIIAAREHGPNFEAVAEVYNDATK--------   -
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.hhhhhhhhh.eeeeeeeeee......hhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeeeee............ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                 2ma8 A  22 AEQVSKQEISHFKLVKVGTINVSQSGGQISSPSDLREKLSELADAKGGKYYHIIAAREHGPNFEAVAEVYNDATKLEHHHHHH 104
                                    31        41        51        61        71        81        91       101   


Chain B from PDB  Type:PROTEIN  Length:83
 aligned with Q7CR88_SALTY | Q7CR88 from UniProtKB/TrEMBL  Length:96

    Alignment length:83
                                                                                                     96        
                                    31        41        51        61        71        81        91    |    -   
         Q7CR88_SALTY    22 AEQVSKQEISHFKLVKVGTINVSQSGGQISSPSDLREKLSELADAKGGKYYHIIAAREHGPNFEAVAEVYNDATK--------   -
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.hhhhhhhhh.eeeeeeeeeee.....hhhhhhhhhhhhhhhhh..eeeeeeeeee..eeeeeeeeee............ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
                 2ma8 B  22 AEQVSKQEISHFKLVKVGTINVSQSGGQISSPSDLREKLSELADAKGGKYYHIIAAREHGPNFEAVAEVYNDATKLEHHHHHH 104
                                    31        41        51        61        71        81        91       101
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2MA8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2MA8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2MA8)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 2MA8)

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 Related Entries

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UniProtKB/TrEMBL
        Q7CR88_SALTY | Q7CR88: 2jna

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