Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)NMR Structure - model 1
(-)NMR Structure - all models
collapse expand < >
Image NMR Structure - model 1
NMR Structure - model 1  (Jmol Viewer)
Image NMR Structure - all models
NMR Structure - all models  (Jmol Viewer)

(-) Description

Title :  1H, 13C AND 15N ASSIGNMENTS OF THE FOUR N-TERMINAL DOMAINS OF HUMAN FIBRILLIN-1
 
Authors :  D. A. Yadin, I. B. Robertson, S. A. Jensen, P. A. Handford, C. Redfield
Date :  17 Apr 13  (Deposition) - 25 Sep 13  (Release) - 20 Nov 13  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  D. A. Yadin, I. B. Robertson, J. Mcnaught-Davis, P. Evans, D. Stoddart P. A. Handford, S. A. Jensen, C. Redfield
Structure Of The Fibrillin-1 N-Terminal Domains Suggests That Heparan Sulfate Regulates The Early Stages Of Microfibril Assembly.
Structure V. 21 1743 2013
PubMed-ID: 24035709  |  Reference-DOI: 10.1016/J.STR.2013.08.004

(-) Compounds

Molecule 1 - FIBRILLIN-1
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21
    Expression System Taxid511693
    Expression System VectorPQE-30
    FragmentFUN-EGF3 REGION OF FIBRILLIN-1, UNP RESIDUES 45-178
    GeneFBN, FBN1
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    Other DetailsCELLS WERE ALSO TRANSFORMED WITH THE PREP4 PLASMID, ENABLING INDUCIBLE EXPRESSION

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2M74)

(-) Sites  (0, 0)

(no "Site" information available for 2M74)

(-) SS Bonds  (11, 11)

NMR Structure
No.Residues
1A:59 -A:68
2A:67 -A:80
3A:85 -A:94
4A:89 -A:100
5A:102 -A:111
6A:119 -A:129
7A:123 -A:134
8A:136 -A:145
9A:150 -A:160
10A:154 -A:166
11A:168 -A:177

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2M74)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (25, 25)

NMR Structure (25, 25)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_075985G55EFBN1_HUMANDisease (MFS)  ---AG55E
02UniProtVAR_075986N57DFBN1_HUMANDisease (MFS)  ---AN57D
03UniProtVAR_017967R62CFBN1_HUMANDisease (MFS)25403AR62C
04UniProtVAR_075987Y63CFBN1_HUMANDisease (ECTOL1)  ---AY63C
05UniProtVAR_075988C68SFBN1_HUMANDisease (ECTOL1)  ---AC68S
06UniProtVAR_065981C80GFBN1_HUMANDisease (MFS)  ---AC80G
07UniProtVAR_017968C89FFBN1_HUMANDisease (MFS)112660651AC89F
08UniProtVAR_075989C100YFBN1_HUMANDisease (MFS)  ---AC100Y
09UniProtVAR_002276C111RFBN1_HUMANDisease (MFS)  ---AC111R
10UniProtVAR_017969R114CFBN1_HUMANDisease (MFS)  ---AR114C
11UniProtVAR_017970S115CFBN1_HUMANDisease (ECTOL1)  ---AS115C
12UniProtVAR_002277R122CFBN1_HUMANDisease (MFS)137854467AR122C
13UniProtVAR_023860C123YFBN1_HUMANDisease (MFS)  ---AC123Y
14UniProtVAR_075990G127DFBN1_HUMANDisease  ---AG127D
15UniProtVAR_002278C129YFBN1_HUMANDisease (MFS)  ---AC129Y
16UniProtVAR_055723H133QFBN1_HUMANPolymorphism363850AH133Q
17UniProtVAR_075991C136SFBN1_HUMANDisease (MFS)  ---AC136S
18UniProtVAR_017971C154SFBN1_HUMANDisease (MFS)  ---AC154S
19UniProtVAR_075992C160RFBN1_HUMANDisease  ---AC160R
20UniProtVAR_075993N164SFBN1_HUMANDisease  ---AN164S
21UniProtVAR_002279C166FFBN1_HUMANDisease (MFS)  ---AC166F
22UniProtVAR_002280C166SFBN1_HUMANDisease (MFS)  ---AC166S
23UniProtVAR_023861C177RFBN1_HUMANDisease (MFS)363853AC177R
24UniProtVAR_075994C177SFBN1_HUMANDisease (MFS)  ---AC177S
25UniProtVAR_075995C177YFBN1_HUMANDisease (MFS)  ---AC177Y

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
NMR Structure * (25, 25)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_075985G55EFBN1_HUMANDisease (MFS)  ---AG55E
02UniProtVAR_075986N57DFBN1_HUMANDisease (MFS)  ---AN57D
03UniProtVAR_017967R62CFBN1_HUMANDisease (MFS)25403AR62C
04UniProtVAR_075987Y63CFBN1_HUMANDisease (ECTOL1)  ---AY63C
05UniProtVAR_075988C68SFBN1_HUMANDisease (ECTOL1)  ---AC68S
06UniProtVAR_065981C80GFBN1_HUMANDisease (MFS)  ---AC80G
07UniProtVAR_017968C89FFBN1_HUMANDisease (MFS)112660651AC89F
08UniProtVAR_075989C100YFBN1_HUMANDisease (MFS)  ---AC100Y
09UniProtVAR_002276C111RFBN1_HUMANDisease (MFS)  ---AC111R
10UniProtVAR_017969R114CFBN1_HUMANDisease (MFS)  ---AR114C
11UniProtVAR_017970S115CFBN1_HUMANDisease (ECTOL1)  ---AS115C
12UniProtVAR_002277R122CFBN1_HUMANDisease (MFS)137854467AR122C
13UniProtVAR_023860C123YFBN1_HUMANDisease (MFS)  ---AC123Y
14UniProtVAR_075990G127DFBN1_HUMANDisease  ---AG127D
15UniProtVAR_002278C129YFBN1_HUMANDisease (MFS)  ---AC129Y
16UniProtVAR_055723H133QFBN1_HUMANPolymorphism363850AH133Q
17UniProtVAR_075991C136SFBN1_HUMANDisease (MFS)  ---AC136S
18UniProtVAR_017971C154SFBN1_HUMANDisease (MFS)  ---AC154S
19UniProtVAR_075992C160RFBN1_HUMANDisease  ---AC160R
20UniProtVAR_075993N164SFBN1_HUMANDisease  ---AN164S
21UniProtVAR_002279C166FFBN1_HUMANDisease (MFS)  ---AC166F
22UniProtVAR_002280C166SFBN1_HUMANDisease (MFS)  ---AC166S
23UniProtVAR_023861C177RFBN1_HUMANDisease (MFS)363853AC177R
24UniProtVAR_075994C177SFBN1_HUMANDisease (MFS)  ---AC177S
25UniProtVAR_075995C177YFBN1_HUMANDisease (MFS)  ---AC177Y

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (3, 3)

NMR Structure (3, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EGF_1PS00022 EGF-like domain signature 1.FBN1_HUMAN134-145
166-177
  2A:134-145
A:166-177
2EGF_2PS01186 EGF-like domain signature 2.FBN1_HUMAN134-145
166-177
313-328
474-488
513-528
555-570
596-611
748-763
790-805
1053-1068
1180-1195
1221-1236
1263-1278
1305-1320
1348-1361
1389-1402
1429-1444
1470-1485
1631-1646
1791-1806
1833-1847
1874-1889
1914-1928
1956-1971
1998-2011
2038-2053
2151-2164
2190-2204
2230-2245
2274-2289
2316-2331
2427-2442
2468-2483
2509-2522
2550-2565
2590-2605
2631-2646
2672-2686
  2A:134-145
A:166-177
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
3EGF_3PS50026 EGF-like domain profile.FBN1_HUMAN146-178
246-287
288-329
490-525
530-571
572-612
613-653
723-764
765-806
807-846
910-951
1028-1069
1070-1112
1113-1154
1155-1196
1197-1237
1238-1279
1280-1317
1322-1362
1363-1401
1404-1445
1446-1482
1487-1527
1606-1647
1648-1684
1766-1807
1808-1848
1849-1886
1891-1926
1930-1972
1973-2012
2013-2054
2127-2165
2166-2205
2206-2246
2247-2290
2291-2332
2402-2439
2444-2484
2485-2521
2524-2566
2567-2606
2607-2643
2648-2687
  1A:146-178
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
NMR Structure * (3, 5)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1EGF_1PS00022 EGF-like domain signature 1.FBN1_HUMAN134-145
166-177
  2A:134-145
A:166-177
2EGF_2PS01186 EGF-like domain signature 2.FBN1_HUMAN134-145
166-177
313-328
474-488
513-528
555-570
596-611
748-763
790-805
1053-1068
1180-1195
1221-1236
1263-1278
1305-1320
1348-1361
1389-1402
1429-1444
1470-1485
1631-1646
1791-1806
1833-1847
1874-1889
1914-1928
1956-1971
1998-2011
2038-2053
2151-2164
2190-2204
2230-2245
2274-2289
2316-2331
2427-2442
2468-2483
2509-2522
2550-2565
2590-2605
2631-2646
2672-2686
  2A:134-145
A:166-177
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
3EGF_3PS50026 EGF-like domain profile.FBN1_HUMAN146-178
246-287
288-329
490-525
530-571
572-612
613-653
723-764
765-806
807-846
910-951
1028-1069
1070-1112
1113-1154
1155-1196
1197-1237
1238-1279
1280-1317
1322-1362
1363-1401
1404-1445
1446-1482
1487-1527
1606-1647
1648-1684
1766-1807
1808-1848
1849-1886
1891-1926
1930-1972
1973-2012
2013-2054
2127-2165
2166-2205
2206-2246
2247-2290
2291-2332
2402-2439
2444-2484
2485-2521
2524-2566
2567-2606
2607-2643
2648-2687
  1A:146-178
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-

(-) Exons   (5, 5)

NMR Structure (5, 5)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENST000003166231ENSE00001525471chr15:48937918-48937772147FBN1_HUMAN-00--
1.2ENST000003166232ENSE00002176401chr15:48937147-48936803345FBN1_HUMAN1-55551A:43-5513
1.3ENST000003166233ENSE00001761744chr15:48905289-4890520783FBN1_HUMAN55-83291A:55-8329
1.4ENST000003166234ENSE00001729100chr15:48903023-4890292599FBN1_HUMAN83-116341A:83-11634
1.5ENST000003166235ENSE00001737946chr15:48892431-4889233696FBN1_HUMAN116-148331A:116-14833
1.6ENST000003166236ENSE00001783191chr15:48888575-4888848096FBN1_HUMAN148-180331A:148-17831
1.7ENST000003166237ENSE00001764592chr15:48830005-48829808198FBN1_HUMAN180-246670--
1.8ENST000003166238ENSE00001793339chr15:48826402-48826277126FBN1_HUMAN246-288430--
1.9ENST000003166239ENSE00001771562chr15:48818452-48818327126FBN1_HUMAN288-330430--
1.10ENST0000031662310ENSE00001744589chr15:48813014-48812856159FBN1_HUMAN330-383540--
1.11ENST0000031662311ENSE00001699841chr15:48808559-48808380180FBN1_HUMAN383-443610--
1.12ENST0000031662312ENSE00001599991chr15:48807724-48807584141FBN1_HUMAN443-490480--
1.13ENST0000031662313ENSE00001788059chr15:48805865-48805746120FBN1_HUMAN490-530410--
1.14ENST0000031662314ENSE00001675795chr15:48802366-48802241126FBN1_HUMAN530-572430--
1.15ENST0000031662315ENSE00001666782chr15:48800901-48800779123FBN1_HUMAN572-613420--
1.16ENST0000031662316ENSE00001721875chr15:48797344-48797222123FBN1_HUMAN613-654420--
1.17ENST0000031662317ENSE00001715942chr15:48796136-48795984153FBN1_HUMAN654-705520--
1.18ENST0000031662318ENSE00001640683chr15:48791235-4879118254FBN1_HUMAN705-723190--
1.19ENST0000031662319ENSE00001612341chr15:48789588-48789463126FBN1_HUMAN723-765430--
1.20ENST0000031662320ENSE00001630897chr15:48788422-48788297126FBN1_HUMAN765-807430--
1.21ENST0000031662321ENSE00001772761chr15:48787785-48787666120FBN1_HUMAN807-847410--
1.22ENST0000031662322ENSE00001661869chr15:48787457-48787320138FBN1_HUMAN847-893470--
1.23ENST0000031662323ENSE00001788284chr15:48786451-4878640151FBN1_HUMAN893-910180--
1.24ENST0000031662324ENSE00001769793chr15:48784783-48784658126FBN1_HUMAN910-952430--
1.25ENST0000031662325ENSE00001717687chr15:48782275-48782048228FBN1_HUMAN952-1028770--
1.26ENST0000031662326ENSE00001613423chr15:48780690-48780565126FBN1_HUMAN1028-1070430--
1.27ENST0000031662327ENSE00001762721chr15:48780438-48780310129FBN1_HUMAN1070-1113440--
1.28ENST0000031662328ENSE00001641154chr15:48779634-48779509126FBN1_HUMAN1113-1155430--
1.29ENST0000031662329ENSE00001800492chr15:48779397-48779272126FBN1_HUMAN1155-1197430--
1.30ENST0000031662330ENSE00001620699chr15:48777693-48777571123FBN1_HUMAN1197-1238420--
1.31ENST0000031662331ENSE00001613453chr15:48776140-48776015126FBN1_HUMAN1238-1280430--
1.32ENST0000031662332ENSE00001753582chr15:48773977-48773852126FBN1_HUMAN1280-1322430--
1.33ENST0000031662333ENSE00001628258chr15:48766847-48766725123FBN1_HUMAN1322-1363420--
1.34ENST0000031662334ENSE00001770461chr15:48766574-48766452123FBN1_HUMAN1363-1404420--
1.35ENST0000031662335ENSE00001613724chr15:48764873-48764748126FBN1_HUMAN1404-1446430--
1.36ENST0000031662336ENSE00000884505chr15:48762953-48762831123FBN1_HUMAN1446-1487420--
1.37ENST0000031662337ENSE00000884504chr15:48760731-48760609123FBN1_HUMAN1487-1528420--
1.38ENST0000031662338ENSE00000686984chr15:48760299-48760135165FBN1_HUMAN1528-1583560--
1.39ENST0000031662339ENSE00000686980chr15:48758055-4875798769FBN1_HUMAN1583-1606240--
1.40ENST0000031662340ENSE00000686976chr15:48757890-48757765126FBN1_HUMAN1606-1648430--
1.41ENST0000031662341ENSE00000884503chr15:48756218-48756096123FBN1_HUMAN1648-1689420--
1.42ENST0000031662342ENSE00000686967chr15:48755437-48755279159FBN1_HUMAN1689-1742540--
1.43ENST0000031662343ENSE00001175019chr15:48752514-4875244372FBN1_HUMAN1742-1766250--
1.44ENST0000031662344ENSE00000884501chr15:48748959-48748834126FBN1_HUMAN1766-1808430--
1.45ENST0000031662345ENSE00000884500chr15:48744881-48744759123FBN1_HUMAN1808-1849420--
1.46ENST0000031662346ENSE00001181714chr15:48741090-48740965126FBN1_HUMAN1849-1891430--
1.47ENST0000031662347ENSE00001175887chr15:48739019-48738903117FBN1_HUMAN1891-1930400--
1.48ENST0000031662348ENSE00000884497chr15:48737701-48737573129FBN1_HUMAN1930-1973440--
1.49ENST0000031662349ENSE00000884496chr15:48736857-48736738120FBN1_HUMAN1973-2013410--
1.50ENST0000031662350ENSE00000884495chr15:48734043-48733918126FBN1_HUMAN2013-2055430--
1.51ENST0000031662351ENSE00000884494chr15:48730114-48729965150FBN1_HUMAN2055-2105510--
1.52ENST0000031662352ENSE00000884493chr15:48729584-4872951966FBN1_HUMAN2105-2127230--
1.53ENST0000031662353ENSE00000884492chr15:48729274-48729158117FBN1_HUMAN2127-2166400--
1.54ENST0000031662354ENSE00001721904chr15:48726910-48726791120FBN1_HUMAN2166-2206410--
1.55ENST0000031662355ENSE00001759584chr15:48725185-48725063123FBN1_HUMAN2206-2247420--
1.56ENST0000031662356ENSE00000884489chr15:48722999-48722868132FBN1_HUMAN2247-2291450--
1.57ENST0000031662357ENSE00000884488chr15:48720668-48720543126FBN1_HUMAN2291-2333430--
1.59ENST0000031662359ENSE00001682471chr15:48719970-48719764207FBN1_HUMAN2333-2402700--
1.60ENST0000031662360ENSE00001657678chr15:48718061-48717936126FBN1_HUMAN2402-2444430--
1.61ENST0000031662361ENSE00001705569chr15:48717688-48717566123FBN1_HUMAN2444-2485420--
1.62ENST0000031662362ENSE00001770578chr15:48714265-48714149117FBN1_HUMAN2485-2524400--
1.63ENST0000031662363ENSE00001771268chr15:48713883-48713755129FBN1_HUMAN2524-2567440--
1.64ENST0000031662364ENSE00001767848chr15:48713003-48712884120FBN1_HUMAN2567-2607410--
1.65ENST0000031662365ENSE00001743300chr15:48707964-48707733232FBN1_HUMAN2607-2684780--
1.66ENST0000031662366ENSE00001804196chr15:48704940-48704766175FBN1_HUMAN2684-2742590--
1.67ENST0000031662367ENSE00001662441chr15:48703576-487005053072FBN1_HUMAN2743-28711290--

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:136
 aligned with FBN1_HUMAN | P35555 from UniProtKB/Swiss-Prot  Length:2871

    Alignment length:136
                                    52        62        72        82        92       102       112       122       132       142       152       162       172      
           FBN1_HUMAN    43 KRRGGGGHDALKGPNVCGSRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPSGQIAPSCGSRSIQHCNIRCMNGGSCSDDHCLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCE 178
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............ee......ee...ee.........ee.........eeee..eee.....ee...................ee....ee....ee.....ee..........eeee..eee........... Sec.struct. author
             SAPs(SNPs) (1) ------------E-D----CC----S-----------G--------F----------Y----------R--CC------CY---D-Y---Q--S-----------------S-----R---S-F----------R- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ---------------------------------------------------------------------------------------------------------------------------S----------S- SAPs(SNPs) (2)
             SAPs(SNPs) (3) --------------------------------------------------------------------------------------------------------------------------------------Y- SAPs(SNPs) (3)
                PROSITE (1) -------------------------------------------------------------------------------------------EGF_1       --------------------EGF_1       - PROSITE (1)
                PROSITE (2) -------------------------------------------------------------------------------------------EGF_2       --------------------EGF_2       - PROSITE (2)
                PROSITE (3) -------------------------------------------------------------------------------------------------------EGF_3  PDB: A:146-178             PROSITE (3)
           Transcript 1 (1) Exon 1.2     ---------------------------Exon 1.4  PDB: A:83-116           -------------------------------Exon 1.6  PDB: A:148-178        Transcript 1 (1)
           Transcript 1 (2) ------------Exon 1.3  PDB: A:55-83       --------------------------------Exon 1.5  PDB: A:116-148         ------------------------------ Transcript 1 (2)
                 2m74 A  43 SARGGGGHDALKGPNVCGSRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPSGQIAPSCGSRSIQHCNIRCMNGGSCSDDHCLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCE 178
                                    52        62        72        82        92       102       112       122       132       142       152       162       172      

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2M74)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2M74)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2M74)

(-) Gene Ontology  (27, 27)

NMR Structure(hide GO term definitions)
Chain A   (FBN1_HUMAN | P35555)
molecular function
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0030023    extracellular matrix constituent conferring elasticity    A component of the extracellular matrix that enables the matrix to recoil after transient stretching.
    GO:0005201    extracellular matrix structural constituent    The action of a molecule that contributes to the structural integrity of the extracellular matrix.
    GO:0005178    integrin binding    Interacting selectively and non-covalently with an integrin.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0032403    protein complex binding    Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0043010    camera-type eye development    The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.
    GO:1990314    cellular response to insulin-like growth factor stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin-like growth factor stimulus.
    GO:0071560    cellular response to transforming growth factor beta stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus.
    GO:0048048    embryonic eye morphogenesis    The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized.
    GO:0022617    extracellular matrix disassembly    A process that results in the breakdown of the extracellular matrix.
    GO:0030198    extracellular matrix organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix.
    GO:0007507    heart development    The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
    GO:0001822    kidney development    The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and/or excretes the end products of body metabolism in the form of urine.
    GO:0001656    metanephros development    The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord. The metanephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine.
    GO:0048050    post-embryonic eye morphogenesis    The process, occurring after embryonic development, by which the anatomical structures of the eye are generated and organized. The eye is the organ of sight.
    GO:0090287    regulation of cellular response to growth factor stimulus    Any process that modulates the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.
    GO:0035582    sequestering of BMP in extracellular matrix    Confining a bone morphogenetic protein (BMP) to the extracellular matrix (ECM), such that it is separated from other components of the signaling pathway, including its cell surface receptor. Bone morphogenetic proteins (BMPs) are secreted as homodimers, non-covalently associated with N-terminal pro-peptides, and are targeted to the extracellular matrix through interaction with matrix proteins.
    GO:0035583    sequestering of TGFbeta in extracellular matrix    Confining TGFbeta to the extracellular matrix (ECM) such that it is separated from other components of the signaling pathway, including its cell surface receptor. TGFbeta is secreted as part of a latent complex that is targeted to the extracellular matrix through latent-TGFbeta-binding protein (LTBP)-mediated association with matrix proteins.
    GO:0001501    skeletal system development    The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton).
cellular component
    GO:0005604    basement membrane    A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0031012    extracellular matrix    A structure lying external to one or more cells, which provides structural support for cells or tissues.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0001527    microfibril    Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins.
    GO:0005578    proteinaceous extracellular matrix    A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity. An example of this component is found in Mus musculus.

 Visualization

(-) Interactive Views

NMR Structure
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 2m74)
 
  Sites
(no "Sites" information available for 2m74)
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2m74)
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  2m74
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  FBN1_HUMAN | P35555
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  129600
    Disease InformationOMIM
  154700
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  FBN1_HUMAN | P35555
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FBN1_HUMAN | P355551apj 1emn 1emo 1lmj 1uzj 1uzk 1uzp 1uzq 2w86

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2M74)