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(-) Description

Title :  NMR SOLUTION STRUCTURE MYXOCCOCCUS XANTHUS CDNL
 
Authors :  M. Jimenez, S. Padmanabhan, Y. Mirassou
Date :  01 Aug 12  (Deposition) - 05 Feb 14  (Release) - 15 Oct 14  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Cdnl, Card, Trcf-Rid, Pf02559, Rna Polymerase, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Gallego-Garcia, Y. Mirassou, D. Garcia-Moreno, M. Elias-Arnanz, M. A. Jimenez, S. Padmanabhan
Structural Insights Into Rna Polymerase Recognition And Essential Function Of Myxococcus Xanthus Cdnl.
Plos One V. 9 08946 2014
PubMed-ID: 25272012  |  Reference-DOI: 10.1371/JOURNAL.PONE.0108946
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - TRANSCRIPTIONAL REGULATOR, CARD FAMILY
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: CDNL, MXAN_2627
    Organism Scientific: MYXOCOCCUS XANTHUS
    Organism Taxid: 246197
    Strain: DK 1622

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2LWJ)

(-) Sites  (0, 0)

(no "Site" information available for 2LWJ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2LWJ)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2LWJ)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:167
 aligned with Q1D927_MYXXD | Q1D927 from UniProtKB/TrEMBL  Length:164

    Alignment length:167
                               1                                                                                                                                                                   
                               |     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       
         Q1D927_MYXXD     - ---MQTSFKTGDKAVYPGQGVGEVMGIEHTEVAGQRQSFYVLRILENGMRIMIPINKVGSVGLREIISEEDVKQVYSILKEKDISVDSTTWNRRYREYMEKIKTGSVFEIAEVLRDLYLLKGDKDLSFGERKMLDTARSLLIKELSLAKDCSEDEIESDLKKIFNLA 164
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................eeeeeeeeee..eeeeeeeee......eeeee.............hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2lwj A   1 GSHMQTSFKTGDKAVYPGQGVGEVMGIEHTEVAGQRQSFYVLRILENGMRIMIPINKVGSVGLREIISEEDVKQVYSILKEKDISVDSTTWNRRYREYMEKIKTGSVFEIAEVLRDLYLLKGDKDLSFGERKMLDTARSLLIKELSLAKDCSEDEIESDLKKIFNLA 167
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2LWJ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2LWJ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2LWJ)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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 Related Entries

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        Q1D927_MYXXD | Q1D927: 2lt3 2lt4

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