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(-) Description

Title :  SOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN OF TETRAHYMENA TELOMERASE PROTEIN P65
 
Authors :  M. Singh, Z. Wang, B. Koo, A. Patel, D. Cascio, K. Collins, J. Feigon
Date :  01 May 12  (Deposition) - 20 Jun 12  (Release) - 01 Aug 12  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Telomerase, P65, La Protein, Larp7, Rrm, Tetrahymena, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Singh, Z. Wang, B. K. Koo, A. Patel, D. Cascio, K. Collins, J. Feigon
Structural Basis For Telomerase Rna Recognition And Rnp Assembly By The Holoenzyme La Family Protein P65.
Mol. Cell V. 47 16 2012
PubMed-ID: 22705372  |  Reference-DOI: 10.1016/J.MOLCEL.2012.05.018

(-) Compounds

Molecule 1 - TELOMERASE ASSOCIATED PROTEIN P65
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET30 LIC
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: TAP65
    Mutation: YES
    Organism Scientific: TETRAHYMENA THERMOPHILA
    Organism Taxid: 5911

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2LSL)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2LSL)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:130
 aligned with Q6JXI6_TETTH | Q6JXI6 from UniProtKB/TrEMBL  Length:542

    Alignment length:159
                                   370       380       390       400       410       420       430       440       450       460       470       480       490       500       510         
         Q6JXI6_TETTH   361 SRKASDEFVSIDVEIKQNCLIKIINIPQGTLKAEVVLAVRHLGYEFYCDYIDENSNQINSNKISLSTQQQNTAQCSNIQIENNLIQQDQHPQLNDLLKEGQAMIRFQNSDEQRLAIQKLLNHNNNKLQIEIRGQICDVISTIPEDEEKNYWNYIKFKKN 519
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .-------...........eeeee......hhhhhhhhhhh......eee..........----------------------...................eeee..hhhhhhhhhhhhhh......eeee..eeeeee...hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2lsl A 368 S-------VSIDVEIKQNCLIKIINIPQGTLKAEVVLAVRHLGYEFYCDYIDENSNQINS----------------------NLIQQDQHPQLNDLLKEGQAMIRFQNSDEQRLAIQKLLNHNNNKLQIEIRGQICDVISTIPEDEEKNYWNYIKFKKN 519
                            |      370       380       390       400       410       420         -         -  |    450       460       470       480       490       500       510         
                            |     369                                                420                    443                                                                            
                          368
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2LSL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2LSL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2LSL)

(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A   (Q6JXI6_TETTH | Q6JXI6)
molecular function
    GO:0003676    nucleic acid binding    Interacting selectively and non-covalently with any nucleic acid.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

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  2lsl
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q6JXI6_TETTH | Q6JXI6: 4erd 4eyt

(-) Related Entries Specified in the PDB File

4erd CRYSTAL STRUCTURE OF P65 C-TERMINAL XRRM2 DOMAIN IN COMPLEX WITH STEM IV OF TELOMERASE RNA
4eyt CRYSTAL STRUCTURE OF P65 C-TERMINAL XRRM2 DOMAIN RELATED ID: 18435 RELATED DB: BMRB