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(-) Description

Title :  CRIMEAN CONGO HEMORRHAGIC FEVER GN ZINC FINGER
 
Authors :  D. F. Estrada, R. N. De Guzman
Date :  27 Dec 10  (Deposition) - 20 Apr 11  (Release) - 29 Jun 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A
NMR Structure *:  A  (1x)
Keywords :  Cytoplasmic Tail, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. F. Estrada, R. N. De Guzman
Structural Characterization Of The Crimean-Congo Hemorrhagi Fever Virus Gn Tail Provides Insight Into Virus Assembly.
J. Biol. Chem. V. 286 21678 2011
PubMed-ID: 21507948  |  Reference-DOI: 10.1074/JBC.M110.216515

(-) Compounds

Molecule 1 - ENVELOPE GLYCOPROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector: PET21A
    Fragment: SEQUENCE DATABASE RESIDUES 734-810
    Gene: GPC
    Organism Scientific: CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS
    Organism Taxid: 11593
    Other Details: MODIFIED TO INCLUDE GB1 SOLUBILITY ENHANCEMENT TAG AT N TERMINUS
    Strain: SPU103/87

 Structural Features

(-) Chains, Units

  1
NMR Structure : A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

NMR Structure (1, 2)
No.NameCountTypeFull Name
1ZN2Ligand/IonZINC ION
NMR Structure * (0, 0)
No.NameCountTypeFull Name
1ZN-1Ligand/IonZINC ION

(-) Sites  (2, 2)

NMR Structure (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:36 , CYS A:39 , HIS A:52 , CYS A:56BINDING SITE FOR RESIDUE ZN A 106
2AC2SOFTWARECYS A:61 , CYS A:64 , HIS A:76 , CYS A:80BINDING SITE FOR RESIDUE ZN A 107

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2L7X)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2L7X)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2L7X)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2L7X)

(-) Exons   (0, 0)

(no "Exon" information available for 2L7X)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:77
 aligned with Q70UR3_9VIRU | Q70UR3 from UniProtKB/TrEMBL  Length:1689

    Alignment length:77
                                   743       753       763       773       783       793       803       
         Q70UR3_9VIRU   734 RELKPQTCTICETTPVNAIDAEMHDLNCSYNICPYCASRLTSDGLARHVTQCPKRKEKVEETELYLNLERIPWVVRK 810
               SCOP domains ----------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------- CATH domains
               Pfam domains Nairovirus_M-2l7xA01 A:29-105                                                 Pfam domains
         Sec.struct. author ................hhhhhhhhhhhhh..............hhhhhhh..hhhhhhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------- Transcript
                 2l7x A  29 RELKPQTCTICETTPVNAIDAEMHDLNCSYNICPYCASRLTSDGLARHVTQCPKRKEKVEETELYLNLERIPWVVRK 105
                                    38        48        58        68        78        88        98
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2L7X)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2L7X)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: Nairovirus_M] (1)

(-) Gene Ontology  (4, 4)

NMR Structure(hide GO term definitions)
Chain A   (Q70UR3_9VIRU | Q70UR3)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0019031    viral envelope    The lipid bilayer of a virion that surrounds the protein capsid. May also contain glycoproteins.

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  2l7x
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