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(-) Description

Title :  NMR SOLUTION STRUCTURE OF THE PROTEIN YP_001092504.1
 
Authors :  B. Mohanty, P. Serrano, M. Geralt, R. Horst, K. Wuthrich, Joint Center Structural Genomics (Jcsg)
Date :  23 Nov 10  (Deposition) - 19 Jan 11  (Release) - 22 Feb 12  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Pj06155C, Duf971, Structural Genomics, Psi-Biology, Protein Structure Initiative, Joint Center For Structural Genomics, Jcsg, Structure Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Mohanty, P. Serrano, M. Geralt, R. Horst, K. Wuthrich
Nmr Solution Structure Of The Protein Yp_001092504. 1
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN YP_001092504.1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PSPEEDET
    Expression System Strain: BL21DE3
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: SHEW_0373
    Organism Scientific: SHEWANELLA LOIHICA
    Organism Taxid: 323850
    Strain: PV-4

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2L6N)

(-) Sites  (0, 0)

(no "Site" information available for 2L6N)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2L6N)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2L6N)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2L6N)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2L6N)

(-) Exons   (0, 0)

(no "Exon" information available for 2L6N)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:132
 aligned with A3Q9U7_SHELP | A3Q9U7 from UniProtKB/TrEMBL  Length:131

    Alignment length:132
                             1                                                                                                                                  
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129  
         A3Q9U7_SHELP     - -MTPQSDTPKVTGLKLKRKSRQLEISFDNGQQFTLSCELLRVYSPSAEVHGHGNPVLVTHKKNVNINAITPVGNYAVKLVFDDGHDTGLYSWKVLYDLASNQVDLWENYLARLRAAKASREPLIDMAVKYHT 131
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains -----------DUF971-2l6nA01 A:12-96                                                               ------------------------------------ Pfam domains
         Sec.struct. author ..........eeeeeeehhh.eeeeee....eeeeehhhhhhh......................eeeeeee...eeeeee........eehhhhhhhhh..hhhhhhhhhhhhhhh............... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2l6n A   1 GMTPQSDTPKVTGLKLKRKSRQLEISFDNGQQFTLSCELLRVYSPSAEVHGHGNPVLVTHKKNVNINAITPVGNYAVKLVFDDGHDTGLYSWKVLYDLASNQVDLWENYLARLRAAKASREPLIDMAVKYHT 132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2L6N)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2L6N)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: DUF971] (5)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 2L6N)

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 Related Entries

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