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(-) Description

Title :  SOLUTION STRUCTURE OF THE SMALL ARCHAEAL MODIFIER PROTEIN 1 (SAMP1) FROM METHANOSARCINA ACETIVORANS
 
Authors :  F. F. Damberger, N. Ranjan, M. Sutter, F. H. -T. Allain, E. Weber-Ban
Date :  24 Oct 10  (Deposition) - 09 Feb 11  (Release) - 09 Feb 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Beta-Grasp Fold, Protein Binding, Samp1, Samp, E1-Like, Samp- Activator, Elsa, Adenylation, Ubiquitin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Ranjan, F. F. Damberger, M. Sutter, F. H. Allain, E. Weber-Ban
Solution Structure And Activation Mechanism Of Ubiquitin-Like Small Archaeal Modifier Proteins.
J. Mol. Biol. V. 405 1040 2011
PubMed-ID: 21112336  |  Reference-DOI: 10.1016/J.JMB.2010.11.040

(-) Compounds

Molecule 1 - METHANOSARCINA ACETIVORANS SAMP1 HOMOLOG
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PROEX
    Gene: MOAD, MA_4086
    Organism Scientific: METHANOSARCINA ACETIVORANS
    Organism Taxid: 2214

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2L52)

(-) Sites  (0, 0)

(no "Site" information available for 2L52)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2L52)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2L52)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:99
 aligned with Q8TIQ6_METAC | Q8TIQ6 from UniProtKB/TrEMBL  Length:97

    Alignment length:99
                              1                                                                                                
                              |      8        18        28        38        48        58        68        78        88         
          Q8TIQ6_METAC    - --MAEVKVKLFANLREAAGTPELPLSGEKVIDVLLSLTDKYPALKYVIFEKGDEKSEILILCGSINILINGNNIRHLEGLETLLKDSDEIGILPPVSGG 97
               SCOP domains --------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------ThiS-2l52A01 A:8-99                                                                          Pfam domains
         Sec.struct. author ....eeeeee.hhhhhhhh..eeeee..hhhhhhhhhhhhhhhhh....................eeee...hhhhh..........eeeeee...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------- Transcript
                  2l52 A  1 GHMAEVKVKLFANLREAAGTPELPLSGEKVIDVLLSLTDKYPALKYVIFEKGDEKSEILILCGSINILINGNNIRHLEGLETLLKDSDEIGILPPVSGG 99
                                    10        20        30        40        50        60        70        80        90
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2L52)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2L52)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: Ubiquitin (279)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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