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(-) Description

Title :  SOLUTION STRUCTURE OF BACTERIOPHAGE LAMBDA GPFII
 
Authors :  K. L. Maxwell, L. Cardarelli, P. Neudecker, A. R. Davidson
Date :  26 Apr 10  (Deposition) - 28 Jul 10  (Release) - 25 Aug 10  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
NMR Structure *:  A  (1x)
Keywords :  Gpfii, Connector Protein, Structural Genomics, Psi, Protein Structure Initiative, Ontario Centre For Structural Proteomics, Ocsp, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  L. Cardarelli, L. G. Pell, P. Neudecker, N. Pirani, A. Liu, L. A. Baker, J. L. Rubinstein, K. L. Maxwell, A. R. Davidson
Phages Have Adapted The Same Protein Fold To Fulfill Multiple Functions In Virion Assembly.
Proc. Natl. Acad. Sci. Usa V. 107 14384 2010
PubMed-ID: 20660769  |  Reference-DOI: 10.1073/PNAS.1005822107

(-) Compounds

Molecule 1 - TAIL ATTACHMENT PROTEIN
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21
    Expression System Taxid511693
    Expression System VectorPET15B
    GeneFII
    Organism ScientificBACTERIOPHAGE LAMBDA
    Organism Taxid10710
    SynonymMINOR CAPSID PROTEIN FII

 Structural Features

(-) Chains, Units

  1
NMR Structure (10x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2KX4)

(-) Sites  (0, 0)

(no "Site" information available for 2KX4)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2KX4)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2KX4)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:117
 aligned with FII_LAMBD | P03714 from UniProtKB/Swiss-Prot  Length:117

    Alignment length:117
                                    10        20        30        40        50        60        70        80        90       100       110       
            FII_LAMBD     1 MADFDNLFDAAIARADETIRGYMGTSATITSGEQSGAVIRGVFDDPENISYAGQGVRVEGSSPSLFVRTDEVRQLRRGDTLTIGEENFWVDRVSPDDGGSCHLWLGRGVPPAVNRRR 117
               SCOP domains d2kx4a_ A: Tail attachment protein gpF3                                                                               SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........................ee.............ee...................eeeehhhhhhh.....eee....eee...........eeee............. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
                 2kx4 A   1 MADFDNLFDAAIARADETIRGYMGTSATITSGEQSGAVIRGVFDDPENISYAGQGVRVEGSSPSLFVRTDEVRQLRRGDTLTIGEENFWVDRVSPDDGGSCHLWLGRGVPPAVNRRR 117
                                    10        20        30        40        50        60        70        80        90       100       110       

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2KX4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2KX4)

(-) Gene Ontology  (5, 5)

NMR Structure(hide GO term definitions)
Chain A   (FII_LAMBD | P03714)
biological process
    GO:0019076    viral release from host cell    The dissemination of mature viral particles from the host cell, e.g. by cell lysis or the budding of virus particles from the cell membrane.
    GO:0019068    virion assembly    A late phase of the viral life cycle during which all the components necessary for the formation of a mature virion collect at a particular site in the cell and the basic structure of the virus particle is formed.
cellular component
    GO:0030430    host cell cytoplasm    The cytoplasm of a host cell.
    GO:0019028    viral capsid    The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres.
    GO:0019012    virion    The complete fully infectious extracellular virus particle.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FII_LAMBD | P037141k0h

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