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(-) Description

Title :  SOLUTION STRUCTURE OF C-TERMINAL DOMAIN OF OXIDIZED NLEG2-3 (RESIDUE 90-191) FROM PATHOGENIC E. COLI O157:H7. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM AND MIDWEST CENTER FOR STRUCTURAL GENOMICS TARGET ET109A
 
Authors :  B. Wu, A. Yee, C. Fares, A. Lemak, A. Semest, M. Claude, A. Singer, A. Edwa A. Savchenko, G. T Montelione, A. Joachimiak, C. H. Arrowsmith, Nort Structural Genomics Consortium (Nesg), Midwest Center For St Genomics (Mcsg), Ontario Centre For Structural Proteomics (O
Date :  29 Jun 09  (Deposition) - 25 Aug 09  (Release) - 18 Jan 12  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Methods Development, U-Box Domain, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Midwest Center For Structural Genomics, Mcsg, Ontario Centre For Structural Proteomics, Ocsp, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Wu, T. Skarina, A. Yee, M. C. Jobin, R. Dileo, A. Semesi, C. Fares, A. Lemak, B. K. Coombes, C. H. Arrowsmith, A. U. Singer, A. Savchenko
Nleg Type 3 Effectors From Enterohaemorrhagic Escherichia Coli Are U-Box E3 Ubiquitin Ligases.
Plos Pathog. V. 6 00960 2010
PubMed-ID: 20585566  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1000960
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN ECS2156
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET15B
    Fragment: RESIDUES 90-191
    Gene: ECS2156, Z2149
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 83334

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2KKY)

(-) Sites  (0, 0)

(no "Site" information available for 2KKY)

(-) SS Bonds  (1, 1)

NMR Structure
No.Residues
1A:141 -A:177

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2KKY)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2KKY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2KKY)

(-) Exons   (0, 0)

(no "Exon" information available for 2KKY)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:102
 aligned with Q8X509_ECO57 | Q8X509 from UniProtKB/TrEMBL  Length:191

    Alignment length:102
                                    99       109       119       129       139       149       159       169       179       189  
         Q8X509_ECO57    90 SQESIQNKISQCKFSVCPERLQCPLEAIQCPITLEQPEKGIFVKNSDGSDVCTLFDAAAFSRLVGEGLPHPLTREPITASIIVKHEECIYDDTRGNFIIKGN 191
               SCOP domains ------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains DUF1076-2kkyA01 A:90-189                                                                            -- Pfam domains
         Sec.struct. author hhhhhhhhhhhh....hhhhhh.hhhhhh..........eeeee.......eeeeehhhhhhhhhh......................eee....eee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------ Transcript
                 2kky A  90 SQESIQNKISQCKFSVCPERLQCPLEAIQCPITLEQPEKGIFVKNSDGSDVCTLFDAAAFSRLVGEGLPHPLTREPITASIIVKHEECIYDDTRGNFIIKGN 191
                                    99       109       119       129       139       149       159       169       179       189
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2KKY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2KKY)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: DUF1076] (2)

(-) Gene Ontology  (3, 3)

NMR Structure(hide GO term definitions)
Chain A   (Q8X509_ECO57 | Q8X509)
molecular function
    GO:0004842    ubiquitin-protein transferase activity    Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
biological process
    GO:0072519    parasitism    An interaction between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms.
    GO:0016567    protein ubiquitination    The process in which one or more ubiquitin groups are added to a protein.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8X509_ECO57 | Q8X509: 2kkx

(-) Related Entries Specified in the PDB File

2kkx REDUCED NLEG2-3 RELATED ID: 16375 RELATED DB: BMRB