2KJ6 - JenaLib

Title :   NMR SOLUTION STRUCTURE OF A TUBULIN FOLDING COFACTOR B OBTAINED FROM ARABIDOPSIS THALIANA: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET AR3436A

Authors :   R. Mani, G. V. T. Swapna, R. Shastry, E. Foote, C. Ciccosanti, M. Jiang, R. Xiao, R. Nair, J. Everett, Y. J. Huang, T. Acton, B. Rost, G. T. Montelione, Northeast Structural Genomics Consortium (Nesg)

Date :   22 May 09 (Deposition) - 21 Jul 09 (Release) - 04 Aug 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A  (20x)

Keywords :   Methods Development, Nesg, Ar3436A, Arabidopsis Thaliana, Tubulin Folding Cofactor B, Solution Nmr, Psi-2, Structural Genomics, Protein Structure Initiative, Northeast Structural Genomics Consortium, Chaperone (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   R. Mani, G. V. T. Swapna, R. Shastry, E. Foote, C. Ciccosanti, M. Jiang, R. Xiao, R. Nair, J. Everett, Y. J. Huang, T. Acton, B. Rost, G. T. Montelione
Nmr Solution Structure Of Tbulin Folding Cofactor B Obtained From Arabidopsis Thaliana: Northeast
To Be Published
PubMed: search
(for further references see the PDB file header)

Compounds

Molecule 1 - TUBULIN FOLDING COFACTOR B
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21(DE3)+ MAGIC
	Expression System Taxid	:	562
	Expression System Vector	:	PET 21-23C
	Fragment	:	SEQUENCE DATABASE RESIDUES 10-96
	Gene	:	AT3G10220
	Organism Common	:	THALE-CRESS
	Organism Scientific	:	ARABIDOPSIS THALIANA
	Organism Taxid	:	3702

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

NMR Structure

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:97
 aligned with TBCB_ARATH | Q67Z52 from UniProtKB/Swiss-Prot  Length:243

    Alignment length:97
                                     10                                                                                      
                                    9 |                                                                                      
                                    |-|       19        29        39        49        59        69        79        89       
            TBCB_ARATH    1 MATSRLQLE-GDDSVHLHITHANLKSFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALELYDDSGSKVAVLSDDSRPLGFFSPFDGFRLHIIDLDP 96
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeee.......eeeee....hhhhhhhhhhhhhh.....eeeeee..........hhhhhhhhhhh.....eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                  2kj6 A  1 MGHHHHHHSHGDDSVHLHITHANLKSFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALELYDDSGSKVAVLSDDSRPLGFFSPFDGFRLHIIDLDP 97
                                    10        20        30        40        50        60        70        80        90

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Classification and Annotation

SCOP Domains (0, 0)

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Pfam Domains (0, 0)

Gene Ontology (7, 7)

NMR Structure(hide GO term definitions)

Chain A (TBCB_ARATH | Q67Z52)

molecular function
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0051301	cell division	The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.
	GO:0009793	embryo development ending in seed dormancy	The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0009524	phragmoplast	Fibrous structure (light microscope view) that arises between the daughter nuclei at telophase and within which the initial partition (cell plate), dividing the mother cell in two (cytokinesis), is formed. Appears at first as a spindle connected to the two nuclei, but later spreads laterally in the form of a ring. Consists of microtubules.

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