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(-) Description

Title :  N-NAFY. N-TERMINAL DOMAIN OF NAFY
 
Authors :  A. H. Phillips, J. A. Hernandez, K. Erbil, J. G. Pelton, D. E. Wemmer, L. M
Date :  01 May 09  (Deposition) - 08 Dec 10  (Release) - 08 Dec 10  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  N-Nafy, Nitrogenase Gamma Subunit, Protein Binding, Metal Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. H. Phillips, J. A. Hernandez, K. Erbil, J. G. Pelton, D. E. Wemmer, L. M. Rubio
Biological Activity And Solution Structure Of The Apo-Dinitrogenase Binding Domain Of Nafy
J. Biol. Chem. 2010
PubMed: search

(-) Compounds

Molecule 1 - NITROGENASE GAMMA SUBUNIT
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PSKB3
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 1-96
    Gene: NAFY
    Organism Scientific: AZOTOBACTER VINELANDII
    Organism Taxid: 354

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:96
 aligned with Q9F5X9_AZOVI | Q9F5X9 from UniProtKB/TrEMBL  Length:243

    Alignment length:96
                                    10        20        30        40        50        60        70        80        90      
          Q9F5X9_AZOVI    1 MVTPVNMSRETALRIALAARALPGTTVGQLLEILHQRIEGPLTEESLQGVSVTDLKIGLAGSEEDVDMLDTPMSALKDAVRILWGEAEVDSLPQPV 96
               SCOP domains ------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhh...hhhhhhhhhh.......hhhhhh..hhhhhhhhhhh...hhhhh....hhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------ Transcript
                  2kic A  1 MVTPVNMSRETALRIALAARALPGTTVGQLLEILHQRIEGPLTEESLQGVSVTDLKIGLAGSEEDVDMLDTPMSALKDAVRILWGEAEVDSLPQPV 96
                                    10        20        30        40        50        60        70        80        90
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 Classification and Annotation

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(-) Gene Ontology  (3, 3)

NMR Structure(hide GO term definitions)
Chain A   (Q9F5X9_AZOVI | Q9F5X9)
molecular function
    GO:0051540    metal cluster binding    Interacting selectively and non-covalently with a cluster of atoms including both metal ions and nonmetal atoms, usually sulfur and oxygen. Examples include iron-sulfur clusters and nickel-iron-sulfur clusters.
biological process
    GO:0051188    cofactor biosynthetic process    The chemical reactions and pathways resulting in the formation of a cofactor, a substance that is required for the activity of an enzyme or other protein.
    GO:0009399    nitrogen fixation    The process in which nitrogen is taken from its relatively inert molecular form (N2) in the atmosphere and converted into nitrogen compounds useful for other chemical processes, such as ammonia, nitrate and nitrogen dioxide.

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        Q9F5X9_AZOVI | Q9F5X9: 1p90

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