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(-) Description

Title :  SOLUTION STRUCTURE OF PFE0790C, A PUTATIVE BOLA-LIKE PROTEIN FROM THE PROTOZOAN PARASITE PLASMODIUM FALCIPARUM.
 
Authors :  G. W. Buchko, A. Yee, A. Semesi, R. Hui, C. H. Arrowsmith, Seattle Struc Genomics Center For Infectious Disease (Ssgcid)
Date :  12 Jan 09  (Deposition) - 20 Jan 09  (Release) - 20 May 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Nmr Solution Structure, Ssgcid, Seattle Structural Genomics Center For Infectious Disease, Structural Genomics, Malaria, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. W. Buchko, A. Yee, A. Semesi, P. J. Myler, C. H. Arrowsmith, R. Hui
Solution-State Nmr Structure Of The Putative Morphogene Protein Bola (Pfe0790C) From Plasmodium Falciparum.
Acta Crystallogr F Struct V. 71 514 2015 Biol Commun
PubMed-ID: 25945703  |  Reference-DOI: 10.1107/S2053230X1402799X

(-) Compounds

Molecule 1 - PUTATIVE UNCHARACTERIZED PROTEIN PFE0790C
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21
    Expression System Taxid: 562
    Gene: PFE0790C
    Organism Scientific: PLASMODIUM FALCIPARUM
    Organism Taxid: 36329
    Strain: 3D7

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2KDN)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:108
 aligned with Q8I3V0_PLAF7 | Q8I3V0 from UniProtKB/TrEMBL  Length:84

    Alignment length:108
                                                  1                                                                                 84  
                                     -         -  |      8        18        28        38        48        58        68        78     |  
         Q8I3V0_PLAF7     - ----------------------MCIQKVIEDKLSSALKPTFLELVDKSCGCGTSFDAVIVSNNFEDKKLLDRHRLVNTILKEELQNIHAFSMKCHTPLEYDKLKSK--   -
               SCOP domains ------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------BolA-2kdnA01 A:31-100                                                 -------- Pfam domains
         Sec.struct. author .......................hhhhhhhhhhhhhhh..eeeeee........eeeeee.hhhh..hhhhhhhhhhhhhhhhhhhh..eeeeeehhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 2kdn A   1 MGSSHHHHHHSSGRENLYFQGHMCIQKVIEDKLSSALKPTFLELVDKSCGCGTSFDAVIVSNNFEDKKLLDRHRLVNTILKEELQNIHAFSMKCHTPLEYDKLKSKGS 108
                                    10        20        30        40        50        60        70        80        90       100
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: BolA] (5)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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