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(-) Description

Title :  NMR SOLUTION STRUCTURE OF AN UNCHARACTERIZED PROTEIN FROM CHLOROBIUM TEPIDUM. NORTHEAST STRUCTURAL GENOMICS TARGET CTR107
 
Authors :  J. L. Mills, Q. Zhang, D. K. Sukumaran, D. Wang, M. Jiang, E. L. Foote, R. X R. Nair, J. K. Everett, G. V. T. Swapna, T. B. Acton, B. Rost, G. T. Montel T. Szyperski, Northeast Structural Genomics Consortium (Nesg)
Date :  29 Dec 08  (Deposition) - 20 Jan 09  (Release) - 07 Mar 12  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Protein Structure, Psi, Nesgc, Structural Genomics, Protein Structure Initiative, Northeast Structural Genomics Consortium, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. L. Mills, Q. Zhang, D. K. Sukumaran, D. Wang, M. Jiang, E. L. Foote, R. Xiao, R. Nair, J. K. Everett, G. V. T. Swapna, T. B. Acton, B. Rost, G. Montelione, T. Szyperski
Solution Nmr Structure Of An Uncharacterized Protein From Chlorobium Tepidum. Northeast Structural Genomics Target Ctr107
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROTEIN CTR107
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET 21-23C
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: CT0179
    Organism Scientific: CHLOROBACULUM TEPIDUM
    Organism Taxid: 1097

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2KCU)

(-) Sites  (0, 0)

(no "Site" information available for 2KCU)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2KCU)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2KCU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2KCU)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2KCU)

(-) Exons   (0, 0)

(no "Exon" information available for 2KCU)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:166
 aligned with Q8KFZ1_CHLTE | Q8KFZ1 from UniProtKB/TrEMBL  Length:158

    Alignment length:166
                                                                                                                                                                                       158        
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       | -      
         Q8KFZ1_CHLTE     1 MDFECQFVCELKELAPVPALLIRTQTTMSELGSLFEAGYHDILQLLAGQGKSPSGPPFARYFGMSAGTFEVEFGFPVEGGVEGSGRVVTGLTPSGKAASSLYIGPYGEIEAVYDALMKWVDDNGFDLSGEAYEIYLDNPAETAPDQLRTRVSLMLHES--------   -
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------GyrI-like-2kcuA01 A:8-156                                                                                                                            ---------- Pfam domains
         Sec.struct. author .........eeee....eeeeeeeeeehhhhhhhhhhhhhh................eeeee.....eeeee..ee..........eeeee....eeeeeeee.....hhhhhhhhhhhhhhhh......eeee........hhhh.eeeeee............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2kcu A   1 MDFECQFVCELKELAPVPALLIRTQTAMSELGSLFEAGYHDILQLLAGQGKSPSGPPFARYFGMSAGTFEVEFGFPVEGGVEGSGRVVTGLTPSGKAASSLYIGPYGEIEAVYDALMKWVDDNGFDLSGEAYEIYLDNPAETAPDQLRTRVSLMLHESLEHHHHHH 166
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2KCU)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2KCU)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: SHS2 (26)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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  Cis Peptide Bonds
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  2kcu
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8KFZ1_CHLTE | Q8KFZ1: 3e0h 5kax

(-) Related Entries Specified in the PDB File

3e0h RELATED ID: 16097 RELATED DB: BMRB RELATED ID: CTR107 RELATED DB: TARGETDB