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(-) Description

Title :  GP16
 
Authors :  M. Gallopin, B. Gilquin, S. Zinn-Justin
Date :  18 Dec 08  (Deposition) - 02 Jun 09  (Release) - 17 Aug 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Beta-Barrel, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Lhuillier, M. Gallopin, B. Gilquin, S. Brasiles, N. Lancelot, G. Letellier, M. Gilles, G. Dethan, E. V. Orlova, J. Couprie, P. Tavares, S. Zinn-Justin
Structure Of Bacteriophage Spp1 Head-To-Tail Connection Reveals Mechanism For Viral Dna Gating.
Proc. Natl. Acad. Sci. Usa V. 106 8507 2009
PubMed-ID: 19433794  |  Reference-DOI: 10.1073/PNAS.0812407106

(-) Compounds

Molecule 1 - BACTERIOPHAGE SPP1 COMPLETE NUCLEOTIDE SEQUENCE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21
    Expression System Taxid: 562
    Expression System Variant: DE3
    Expression System Vector: PLYSS
    Mutation: YES
    Organism Common: BACTERIOPHAGE SPP1
    Organism Scientific: BACILLUS PHAGE SPP1
    Organism Taxid: 10724

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:109
 aligned with HCP16_BPSPP | O48446 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:109
                                    10        20        30        40        50        60        70        80        90       100         
          HCP16_BPSPP     1 MYEEFPDVITFQSYVEQSNGEGGKTYKWVDEFTAAAHVQPISQEEYYKAQQLQTPIGYNIYTPYDDRIDKKMRVIYRGKIVTFIGDPVDLSGLQEITRIKGKEDGAYVG 109
               SCOP domains ------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeee...........eeeeeeeeeeeeee................eeeeeee........eeeee..eeeeeeeeeee......eeeeeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 2kca A  35 MYEEFRDVITFQSYVEQSNGEGGKTYKWVDEFTAAAHVQPISQEEYYKAQQLQTPIGYNIYTPYDDRIDKKMRVIYRGKIVTFIGDPVDLSGLQEITRIKGKEDGAYVG 143
                                    44        54        64        74        84        94       104       114       124       134
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 Classification and Annotation

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(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HCP16_BPSPP | O48446: 5a20 5a21

(-) Related Entries Specified in the PDB File

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