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(-) Description

Title :  NMR STRUCTURE OF PROTEIN Q60C73_METCA. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MCR1
 
Authors :  K. K. Singarapu, Y. Wu, A. Eletsky, D. Sukumaran, D. Parish, C. X. Chen, C. Nwosu, M. Maglaqui, R. Xiao, J. Liu, M. C. Baran, G. V. T. Swapna, T. B. Acton, B. Rost, G. T. Montelione, T. Szyperski, Northeast Structural Genomics Consortium (Nesg)
Date :  29 Jun 07  (Deposition) - 31 Jul 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B  (20x)
Keywords :  Homodimer, Protein Structure, Nmr Spectroscopy, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. K. Singarapu, Y. Wu, A. Eletsky, D. Sukumaran, D. Parish, C. X. Chen, C. Nwosu, M. Maglaqui, R. Xiao, J. Liu, M. C. Baran, G. V. T. Swapna, T. B. Acton, B. Rost, G. T. Montelione, T. Szyperski
Nmr Structure Of Protein Q60C73_metca.
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET22
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: MCA0237
    Organism Scientific: METHYLOCOCCUS CAPSULATUS
    Organism Taxid: 414
    Strain: BATH, NCIMB 11132

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2JS5)

(-) Sites  (0, 0)

(no "Site" information available for 2JS5)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2JS5)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2JS5)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2JS5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2JS5)

(-) Exons   (0, 0)

(no "Exon" information available for 2JS5)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:71
 aligned with Q60C73_METCA | Q60C73 from UniProtKB/TrEMBL  Length:63

    Alignment length:71
                                                                                         63        
                                    10        20        30        40        50        60  |      - 
          Q60C73_METCA    1 MSEGAEELKAKLKKLNAQATALKMDLHDLAEDLPTGWNRIMEVAEKTYEAYRQLDEFRKSTAS--------  -
               SCOP domains ----------------------------------------------------------------------- SCOP domains
               CATH domains 2js5A00 A:1-71 Helix hairpin bin                                        CATH domains
               Pfam domains ----------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------- Transcript
                  2js5 A  1 MSEGAEELKAKLKKLNAQATALKMDLHDLAEDLPTGWNRIMEVAEKTYEAYRQLDEFRKSTASLEHHHHHH 71
                                    10        20        30        40        50        60        70 


Chain B from PDB  Type:PROTEIN  Length:71
 aligned with Q60C73_METCA | Q60C73 from UniProtKB/TrEMBL  Length:63

    Alignment length:71
                                                                                         63        
                                    10        20        30        40        50        60  |      - 
          Q60C73_METCA    1 MSEGAEELKAKLKKLNAQATALKMDLHDLAEDLPTGWNRIMEVAEKTYEAYRQLDEFRKSTAS--------  -
               SCOP domains ----------------------------------------------------------------------- SCOP domains
               CATH domains 2js5B00 B:1-71 Helix hairpin bin                                        CATH domains
           Pfam domains (1) Rop-like-2js5B01 B:1-63                                        -------- Pfam domains (1)
           Pfam domains (2) Rop-like-2js5B02 B:1-63                                        -------- Pfam domains (2)
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------- Transcript
                  2js5 B  1 MSEGAEELKAKLKKLNAQATALKMDLHDLAEDLPTGWNRIMEVAEKTYEAYRQLDEFRKSTASLEHHHHHH 71
                                    10        20        30        40        50        60        70
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2JS5)

(-) CATH Domains  (1, 2)

NMR Structure
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 2)

NMR Structure
(-)
Clan: no clan defined [family: Rop-like] (1)

(-) Gene Ontology  (3, 3)

NMR Structure(hide GO term definitions)
Chain A,B   (Q60C73_METCA | Q60C73)
molecular function
    GO:0003674    molecular_function    Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
biological process
    GO:0008150    biological_process    Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
cellular component
    GO:0005575    cellular_component    The part of a cell, extracellular environment or virus in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

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  2js5
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 Related Entries

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(-) Related Entries Specified in the PDB File

mcr1 RELATED ID: 15354 RELATED DB: BMRB