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(-) Description

Title :  NMR SOLUTION STRUCTURE OF BACILLUS SUBTILIS YOBA 21-120: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SR547
 
Authors :  J. R. Cort, T. A. Ramelot, C. X. Chen, M. Jang, K. Cunningham, L. Ma, R. Xiao, J. Liu, M. C. Baran, T. B. Acton, B. Rost, G. T. Montelione, M. A. Kennedy, Northeast Structural Genomics Consortium (Nesg)
Date :  06 Jun 07  (Deposition) - 03 Jul 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Protein, Ob-Fold, Beta Barrel, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. R. Cort
Nmr Solution Structure Of Bacillus Subtilis Yoba 21-120: Northeast Structural Genomics Consortium Target Sr547
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN YOBA
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21(DE3)+MAGIC
    Expression System Taxid562
    Expression System VectorPET21
    Expression System Vector TypeVECTOR
    FragmentSEQUENCE DATABASE RESIDUES 21-120
    GeneYOBA
    Organism ScientificBACILLUS SUBTILIS
    Organism Taxid1423

 Structural Features

(-) Chains, Units

  
NMR Structure (20x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2JQO)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (1, 20)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20Asn A:88 -Pro A:89

 Sequence-Structure Mapping

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:108
 aligned with YOBA_BACSU | O31835 from UniProtKB/Swiss-Prot  Length:120

    Alignment length:108
                                                                                                                             120        
                                    30        40        50        60        70        80        90       100       110       120        
           YOBA_BACSU    21 CNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKEDYNLSEGQLMNKFKNNIVIVGLSEIDNTDDLKRGEKIKVWFHTRKESNPPSATIQKYELL--------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------2jqoA01 A:13-100 Nucleic acid-binding proteins                                          -------- CATH domains
               Pfam domains -DUF3221-2jqoA01 A:2-100                                                                            -------- Pfam domains
         Sec.struct. author .............eeeeeeeeee...eeeee........hhhhhhhhhhhhhh...eeeee.....hhhhh...eeeeeeeeeee.....eeeeeeeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 2jqo A   1 MNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKEDYNLSEGQLMNKFKNNIVIVGLSEIDNTDDLKRGEKIKVWFHTRKESNPPSATIQKYELLLEHHHHHH 108
                                    10        20        30        40        50        60        70        80        90       100        

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (1, 1)

NMR Structure

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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  Cis Peptide Bonds
    Asn A:88 - Pro A:89   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        YOBA_BACSU | O318354qy7

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