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(-) Description

Title :  SOLUTION STRUCTURE OF APO-DR1885 FROM DEINOCOCCUS RADIODURANS
 
Authors :  L. Banci, I. Bertini, S. Ciofi Baffoni, E. Katsari, N. Katsaros, K. Kub
Date :  30 May 07  (Deposition) - 12 Jun 07  (Release) - 13 Jul 11  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Copper Binding Protein, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Banci, I. Bertini, S. Ciofi Baffoni, E. Katsari, N. Katsaros, K. Kubicek, S. Mangani
A Copper(I) Protein Possibly Involved In The Assembly Of Cu Center Of Bacterial Cytochrome C Oxidase
Proc. Natl. Acad. Sci. Usa V. 102 3994 2005
PubMed-ID: 15753304  |  Reference-DOI: 10.1073/PNAS.0406150102

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21 (DE3) PLYSS
    Expression System Taxid: 562
    Expression System Vector: PET21A(+)
    Expression System Vector Type: VECTOR
    Fragment: SEQUENCE DATABASE RESIDUES 35-178
    Gene: DR1885
    Organism Scientific: DEINOCOCCUS RADIODURANS
    Organism Taxid: 243230
    Strain: R1

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:149
 aligned with Q9RT80_DEIRA | Q9RT80 from UniProtKB/TrEMBL  Length:178

    Alignment length:149
                                                                                                                                                                          178    
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173    |    
         Q9RT80_DEIRA    34 TGHTMPAHTPPAQTAPAAQKAGAQALPVTVQGATVAAVPPSIRDTAAYMTLTNKSDQPIKLVGAATPLATSPMLMTTTHSGGMAGMKMVPWLTIPARGTLTLQRDGDHVMLMGLKRPLKVGETVNITLKATDGRTLNVAATVKKN----   -
               SCOP domains d2jqaa1 A:1-149 Hypothetical protein DR1885                                                                                                           SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----------------------------DUF461-2jqaA01 A:30-139                                                                                       ---------- Pfam domains
         Sec.struct. author .................................ee........eeeeeee.........ee.eee.....eee..................ee.......eehhhhh.eeee.............eeee.....eeee..ee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jqa A   1 MGHTMPAHTPPAQTAPAAQKAGAQALPVTVQGATVAAVPPSIRDTAAYMTLTNKSDQPIKLVGAATPLATSPMLMTTTHSGGMAGMKMVPWLTIPARGTLTLQRDGDHVMLMGLKRPLKVGETVNITLKATDGRTLNVAATVKKNIEGR 149
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: DUF461] (5)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9RT80_DEIRA | Q9RT80: 1x9l

(-) Related Entries Specified in the PDB File

1x9l