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(-) Description

Title :  BPP3783_115-220
 
Authors :  G. S. Shaw, M. J. Revington, A. Savichenko, C. H. Arrowsmith, Ontario Centre For Structural Proteomics (Ocsp)
Date :  10 May 07  (Deposition) - 20 May 08  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  All Alpha Helical Protein, Type Iii Secretion Effector Protein, Structural Genomics, Ontario Centre For Structural Proteomics, Ocsp (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. J. Revington, G. S. Shaw, A. Savichenko, C. H. Arrowsmith
Bpp3783_115-220
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21
    Expression System Vector: PET15B
    Expression System Vector Type: VECTOR
    Fragment: SEQUENCE DATABASE RESIDUES, 115-220
    Gene: BPP3783
    Organism Scientific: BORDETELLA PARAPERTUSSIS

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2JPF)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:106
 aligned with Q7W485_BORPA | Q7W485 from UniProtKB/TrEMBL  Length:657

    Alignment length:106
                                   124       134       144       154       164       174       184       194       204       214      
         Q7W485_BORPA   115 KQQLQEHAPSHANLDVKWLDGLRAGSMALQGDVKVWMQNLEDLHTRRPDEFTARLQQSTDALYSHLEAQWAKQHGTPPTASDVVGMPQWQEYTAMLRERFAGLDTI 220
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains DUF3220-2jpfA01 A:1-106                                                                                    Pfam domains
         Sec.struct. author .............................hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 2jpf A   1 KQQLQEHAPSHANLDVKWLDGLRAGSMALQGDVKVWMQNLEDLHTRRPDEFTARLQQSTDALYSHLEAQWAKQHGTPPTASDVVGMPQWQEYTAMLRERFAGLDTI 106
                                    10        20        30        40        50        60        70        80        90       100
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2JPF)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: DUF3220] (1)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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