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(-) Description

Title :  STRUCTURE OF BOMBYX MORI CHEMOSENSORY PROTEIN 1 IN SOLUTION
 
Authors :  S. Jansen, L. Zidek, J. Chmelik, P. Novak, P. Padrta, J. Picimbon, C. Lofstedt, V. Sklenar
Date :  02 Feb 07  (Deposition) - 20 Nov 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
Keywords :  Bmorcsp1, Csp1, Ligand Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Jansen, J. Chmelik, L. Zidek, P. Padrta, P. Novak, Z. Zdrahal, J. -F. Picimbon, C. Lofstedt, V. Sklenar
Structure Of Bombyx Mori Chemosensory Protein 1 In Solution
Arch. Insect Biochem. Physiol. V. 66 135 2007
PubMed-ID: 17966128  |  Reference-DOI: 10.1002/ARCH.20205
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CHEMOSENSORY PROTEIN CSP1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET32A
    Expression System Vector Type: VECTOR
    Fragment: SEQUENCE DATABASE RESIDUES 20-127
    Organism Common: DOMESTIC SILKWORM
    Organism Scientific: BOMBYX MORI
    Organism Taxid: 7091
    Synonym: CHEMOSENSORY PROTEIN 4, HYPOTHETICAL PROTEIN

 Structural Features

(-) Chains, Units

  
NMR Structure (10x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2JNT)

(-) Sites  (0, 0)

(no "Site" information available for 2JNT)

(-) SS Bonds  (2, 2)

NMR Structure
No.Residues
1A:26 -A:33
2A:52 -A:55

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2JNT)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 2JNT)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:108
 aligned with Q8MMK7_BOMMO | Q8MMK7 from UniProtKB/TrEMBL  Length:127

    Alignment length:108
                                    29        39        49        59        69        79        89        99       109       119        
         Q8MMK7_BOMMO    20 YTDKYDKINLQEILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKYEDRAKAKGIVIPE 127
               SCOP domains d2jnta_ A: automated matches                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains OS-D-2jntA01 A:1-95                                                                            ------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 2jnt A   1 YTDKYDKINLQEILENKRLLESYMDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKYEDRAKAKGIVIPE 108
                                    10        20        30        40        50        60        70        80        90       100
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2JNT)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: no clan defined [family: OS-D] (4)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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(-) Related Entries Specified in the PDB File

6943 ENTRY CONTAINING RESONANCE ASSIGNMENT FOR THIS MOLECULAR SYSTEM