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(-) Description

Title :  STRUCTURE OF A PUTATIVE ACETYLTRANSFERASE (ACIAD1637) FROM ACINETOBACTER BAYLYI ADP1
 
Authors :  A. M. Davies, R. Tata, A. Snape, B. J. Sutton, P. R. Brown
Date :  10 Sep 08  (Deposition) - 20 Jan 09  (Release) - 07 Apr 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.35
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Phosphinothricin, Acetyltransferase, Transferase, Methionine Sulfoximine (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. M. Davies, R. Tata, A. Snape, B. J. Sutton, P. R. Brown
Structure And Substrate Specificity Of Acetyltransferase Aciad1637 From Acinetobacter Baylyi Adp1.
Biochimie V. 91 484 2009
PubMed-ID: 19135125  |  Reference-DOI: 10.1016/J.BIOCHI.2008.12.003

(-) Compounds

Molecule 1 - PUTATIVE PHOSPHINOTHRICIN N-ACETYLTRANSFERASE
    Atcc: 33305
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: ACINETOBACTER BAYLYI
    Organism Taxid: 202950
    Strain: ADP1
    Synonym: PUTATIVE ACETYLTRANSFERASE ACIAD1637

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 28)

Asymmetric/Biological Unit (4, 28)
No.NameCountTypeFull Name
1ACT15Ligand/IonACETATE ION
2AZI5Ligand/IonAZIDE ION
3NA2Ligand/IonSODIUM ION
4PEG6Ligand/IonDI(HYDROXYETHYL)ETHER

(-) Sites  (28, 28)

Asymmetric Unit (28, 28)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETRP A:52 , SER A:95 , TYR A:97 , HOH A:2027 , HOH A:2086BINDING SITE FOR RESIDUE ACT A1183
02AC2SOFTWAREALA C:37 , SER C:95 , TYR C:97 , CYS C:130 , ACT C:1184 , NA C:1191 , HOH C:2052BINDING SITE FOR RESIDUE ACT C1183
03AC3SOFTWAREARG A:11 , PHE F:10 , ARG F:11 , PHE F:12 , HOH F:2053BINDING SITE FOR RESIDUE ACT F1183
04AC4SOFTWAREHIS C:94 , SER C:95 , VAL C:96 , ACT C:1183 , HOH C:2052BINDING SITE FOR RESIDUE ACT C1184
05AC5SOFTWAREHIS B:94 , SER B:95 , VAL B:96BINDING SITE FOR RESIDUE ACT B1183
06AC6SOFTWAREILE C:98 , GLY C:104 , LEU C:105 , LEU C:107 , SER C:108 , HOH C:2036BINDING SITE FOR RESIDUE ACT C1185
07AC7SOFTWAREASN A:34 , THR A:36 , PHE A:160 , ARG A:162 , HOH A:2087 , PRO C:43 , ARG C:44 , SER C:45BINDING SITE FOR RESIDUE ACT A1184
08AC8SOFTWAREALA E:37 , SER E:95 , CYS E:130 , HOH E:2067 , HOH E:2068BINDING SITE FOR RESIDUE ACT E1183
09AC9SOFTWAREASN C:34 , THR C:36 , PHE C:160 , ARG C:162 , PRO E:43 , ARG E:44 , SER E:45BINDING SITE FOR RESIDUE ACT C1186
10BC1SOFTWAREGLY B:161 , GLN C:143 , ILE C:148 , HIS C:149 , HOH C:2053BINDING SITE FOR RESIDUE ACT C1187
11BC2SOFTWAREHIS D:94 , SER D:95 , VAL D:96 , HOH D:2046BINDING SITE FOR RESIDUE ACT D1183
12BC3SOFTWARETRP E:163 , HOH E:2069BINDING SITE FOR RESIDUE ACT E1184
13BC4SOFTWAREILE E:98 , ARG E:103 , GLY E:104 , SER E:108 , HOH E:2048 , HOH E:2070BINDING SITE FOR RESIDUE ACT E1185
14BC5SOFTWAREARG C:44 , TRP C:52 , SER C:95 , TYR C:97 , HOH C:2018BINDING SITE FOR RESIDUE ACT C1188
15BC6SOFTWAREARG D:11 , PHE E:12 , HIS E:110BINDING SITE FOR RESIDUE ACT E1186
16BC7SOFTWARETYR F:97 , ILE F:98 , ARG F:103 , HOH F:2007BINDING SITE FOR RESIDUE AZI F1184
17BC8SOFTWAREARG B:11 , ARG C:11 , PHE C:12BINDING SITE FOR RESIDUE AZI C1189
18BC9SOFTWAREPHE D:160 , HIS E:149 , THR E:152 , GLN E:154BINDING SITE FOR RESIDUE AZI E1187
19CC1SOFTWARETRP D:163 , GLN E:143 , HIS E:149BINDING SITE FOR RESIDUE AZI E1188
20CC2SOFTWARETHR F:36 , ALA F:37 , ILE F:131 , ASP F:132 , ASN F:135BINDING SITE FOR RESIDUE AZI F1185
21CC3SOFTWARELYS A:89 , SER A:122 , HOH A:2032BINDING SITE FOR RESIDUE PEG A1185
22CC4SOFTWAREASN D:60 , PHE D:61 , TRP D:79 , LYS D:89 , SER D:122BINDING SITE FOR RESIDUE PEG D1184
23CC5SOFTWAREPHE E:61 , TRP E:79 , LYS E:89BINDING SITE FOR RESIDUE PEG E1189
24CC6SOFTWAREPHE C:61 , TRP C:79 , LYS C:89 , SER C:122BINDING SITE FOR RESIDUE PEG C1190
25CC7SOFTWAREPHE B:61 , TRP B:79 , LYS B:89 , SER B:122 , GLU B:123BINDING SITE FOR RESIDUE PEG B1184
26CC8SOFTWAREPHE F:61 , TRP F:79 , LYS F:89 , SER F:122 , GLU F:123BINDING SITE FOR RESIDUE PEG F1186
27CC9SOFTWAREACT C:1183 , HOH C:2012 , ARG D:83 , TYR D:88BINDING SITE FOR RESIDUE NA C1191
28DC1SOFTWAREARG F:83 , TYR F:88BINDING SITE FOR RESIDUE NA E1190

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2JLM)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Thr A:175 -Pro A:176
2Thr B:175 -Pro B:176
3Thr C:175 -Pro C:176
4Thr D:175 -Pro D:176
5Thr E:175 -Pro E:176
6Thr F:175 -Pro F:176

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2JLM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2JLM)

(-) Exons   (0, 0)

(no "Exon" information available for 2JLM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:177
 aligned with Q6FBS8_ACIAD | Q6FBS8 from UniProtKB/TrEMBL  Length:182

    Alignment length:177
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       
         Q6FBS8_ACIAD     6 TTTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee.hhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh...eeeeee....eeeeeeeee...hhhhh.eeeeeeee.......hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jlm A   6 TTTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       


Chain B from PDB  Type:PROTEIN  Length:179
 aligned with Q6FBS8_ACIAD | Q6FBS8 from UniProtKB/TrEMBL  Length:182

    Alignment length:182
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180  
         Q6FBS8_ACIAD     1 MFSPSTTTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...---...eeeee.hhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh..eeeeee....eeeeeeeee...hhhhh.eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jlm B   1 MFS---TTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
                              |   | 10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180  
                              3   7                                                                                                                                                                               


Chain C from PDB  Type:PROTEIN  Length:177
 aligned with Q6FBS8_ACIAD | Q6FBS8 from UniProtKB/TrEMBL  Length:182

    Alignment length:177
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       
         Q6FBS8_ACIAD     6 TTTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeee.hhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...eeeee.....eeeeeeeee...hhhhh.eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jlm C   6 TTTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       


Chain D from PDB  Type:PROTEIN  Length:182
 aligned with Q6FBS8_ACIAD | Q6FBS8 from UniProtKB/TrEMBL  Length:182

    Alignment length:182
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180  
         Q6FBS8_ACIAD     1 MFSPSTTTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeee.hhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh...eeeeee....eeeeeeeee...hhhhh.eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jlm D   1 MFSPSTTTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180  


Chain E from PDB  Type:PROTEIN  Length:179
 aligned with Q6FBS8_ACIAD | Q6FBS8 from UniProtKB/TrEMBL  Length:182

    Alignment length:179
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173         
         Q6FBS8_ACIAD     4 PSTTTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee.eeee.hhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh....eeeee.....eeeeeeeee...hhhhh.eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jlm E   4 PSTTTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173         


Chain F from PDB  Type:PROTEIN  Length:180
 aligned with Q6FBS8_ACIAD | Q6FBS8 from UniProtKB/TrEMBL  Length:182

    Alignment length:182
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180  
         Q6FBS8_ACIAD     1 MFSPSTTTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ---------------Acetyltransf_4-2jlmF01 F:16-167                                                                                                                         --------------- Pfam domains (1)
           Pfam domains (2) ---------------Acetyltransf_4-2jlmF02 F:16-167                                                                                                                         --------------- Pfam domains (2)
           Pfam domains (3) ---------------Acetyltransf_4-2jlmF03 F:16-167                                                                                                                         --------------- Pfam domains (3)
           Pfam domains (4) ---------------Acetyltransf_4-2jlmF04 F:16-167                                                                                                                         --------------- Pfam domains (4)
           Pfam domains (5) ---------------Acetyltransf_4-2jlmF05 F:16-167                                                                                                                         --------------- Pfam domains (5)
           Pfam domains (6) ---------------Acetyltransf_4-2jlmF06 F:16-167                                                                                                                         --------------- Pfam domains (6)
         Sec.struct. author ..--......eeee.hhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh..eeeee.....eeeeeeeee...hhhhh.eeeeeeee.......hhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jlm F   1 MF--STTTLFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLTLDTPLHPQDD 182
                             |  |   10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180  
                             2  5
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2JLM)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2JLM)

(-) Pfam Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Clan: Acetyltrans (109)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (Q6FBS8_ACIAD | Q6FBS8)
molecular function
    GO:0008080    N-acetyltransferase activity    Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

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